Evidence map›Paper›PMID 25807353›Full record

ReviewCurrent opinion in clinical nutrition and metabolic care2015

Use of mRNA expression signatures to discover small molecule inhibitors of skeletal muscle atrophy.

Christopher M Adams, Scott M Ebert, Michael C Dyle

Registry-linked trialOpen access · hybridAbstract readReview
In one paragraph

Review in Current opinion in clinical nutrition and metabolic care, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03665051 (Electrical Stimulation of Human Myocytes in Microgravity), which is not on this map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03665051 active not recruitingnot on this mapstarted 2019, after this paper: background citation

Electrical Stimulation of Human Myocytes in Microgravity: An In Vitro Model to Evaluate Therapeutics to Counteract Muscle Wasting (microG)

TypeobservationalSponsorAdventHealth Translational Research InstituteRan2019 to 2025Enrolled75ConditionsSarcopeniaArmsMuscle Tissue Biopsy, Maximal Oxygen Consumption (V02max)
3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
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  8. Review
  9. Article
  10. Review
  11. Amino Acid Sensing in Skeletal Muscle.Trends in endocrinology and metabolism: TEM · 2016
    Review
  12. Mechanisms of protein balance in skeletal muscle.Domestic animal endocrinology · 2016
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Christopher M AdamsaDepartment of Internal Medicine, Department of Molecular Physiology and Biophysics, and the Fraternal Order of Eagles Diabetes Research Center, Roy J. and Lucille A. Carver College of Medicine, The University of Iowa, Iowa City bIowa City Veterans Affairs Medical Center, Iowa City cEmmyon, Inc., Coralville, Iowa, USA.
Scott M Ebert
Michael C Dyle
University of Iowa · USFraternal Order of Eagles · US

Funding

Molecular Pathogenesis of Skeletal Muscle AtrophyR01AR059115 · NIAMS · UNIVERSITY OF IOWA · PI ADAMS, CHRISTOPHER M · 2010 to 2014
$1.6M
Development of Novel Small Molecule Therapies for Skeletal Muscle AtrophyR41AG047684 · NIA · EMMYON, INC. · PI ADAMS, CHRISTOPHER M, EBERT, SCOTT MATTHEW · 2014 to 2014
$225k
Development of novel therapies for aging-induced skeletal muscle atrophy.R43AG044898 · NIA · EMMYON, INC. · PI ADAMS, CHRISTOPHER M, EBERT, SCOTT MATTHEW · 2013 to 2013
$160k
Molecular Mechanisms of Age-related Muscle LossI01BX000976 · VA · IOWA CITY VA MEDICAL CENTER · PI YOREK, MARK A. · 2012 to 2022
–
Prevention and Treatment of Skeletal Muscle AtrophyI01RX001477 · VA · IOWA CITY VA MEDICAL CENTER · PI ADAMS, CHRISTOPHER M · 2015 to 2017
–
BLRD VA I01 BX000976NIAMS NIH HHS 5R01AR059115-05NIAMS NIH HHS R01 AR059115NIA NIH HHS 1R41AG047684-01NIA NIH HHS 1R43AG044898-01NIA NIH HHS F31AG04603801NIA NIH HHS R41 AG047684NIA NIH HHS R43 AG044898RRD VA I01 RX001477
6 · The paper itself

Abstract

purpose of reviewHere, we discuss a recently developed experimental strategy for discovering small molecules with potential to prevent and treat skeletal muscle atrophy. RECENT

findingsMuscle atrophy involves and requires widespread changes in skeletal muscle gene expression, which generate complex but measurable patterns of positive and negative changes in skeletal muscle mRNA levels (a.k.a. mRNA expression signatures of muscle atrophy). Many bioactive small molecules generate their own characteristic mRNA expression signatures, and by identifying small molecules whose signatures approximate mirror images of muscle atrophy signatures, one may identify small molecules with potential to prevent and/or reverse muscle atrophy. Unlike a conventional drug discovery approach, this strategy does not rely on a predefined molecular target but rather exploits the complexity of muscle atrophy to identify small molecules that counter the entire spectrum of pathological changes in atrophic muscle. We discuss how this strategy has been used to identify two natural compounds, ursolic acid and tomatidine, that reduce muscle atrophy and improve skeletal muscle function. SUMMARY: Discovery strategies based on mRNA expression signatures can elucidate new approaches for preserving and restoring muscle mass and function.

Indexed as

Drug DiscoveryGene ExpressionHumansMuscle ProteinsMuscle, SkeletalMuscular AtrophyRNA, MessengerSignal TransductionTomatineTriterpenesUrsolic AcidMuscle ProteinsRNA, MessengertomatidineTomatineTriterpenesUrsolic Acid

Identifiers

PMID25807353
PMCPMC5512448
OpenAlexW2312467573

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.