Evidence map›Paper›PMID 25806812›Full record

ArticlePloS one2015

Phylogenetic reconstruction by cross-species chromosome painting and G-banding in four species of Phyllostomini tribe (Chiroptera, Phyllostomidae) in the Brazilian Amazon: an independent evidence for monophyly.

Talita Fernanda Augusto Ribas, Luis Reginaldo Ribeiro Rodrigues, Cleusa Yoshiko Nagamachi, Anderson José Baia Gomes, Jorge das Dores Rissino, Patricia Caroline Mary O'Brien, Fengtang Yang, Malcolm Andrew Ferguson-Smith, Julio Cesar Pieczarka

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
6.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Comparative cytogenetics of two species ofComparative cytogenetics · 2021
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Centromeric enrichment of LINE-1 retrotransposons and its significance for the chromosome evolution of Phyllostomid bats.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2017
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Talita Fernanda Augusto RibasLaboratório de Citogenética, ICB, Universidade Federal do Pará, Belém, Pará, Brazil.
Luis Reginaldo Ribeiro RodriguesLaboratório de Genética e Biodiversidade, ICED, Universidade Federal do Oeste do Pará, Santarém, Pará, Brazil.
Cleusa Yoshiko NagamachiLaboratório de Citogenética, ICB, Universidade Federal do Pará, Belém, Pará, Brazil; CNPQ Researcher, Belém, Pará, Brazil.
Anderson José Baia GomesLaboratório de Citogenética, ICB, Universidade Federal do Pará, Belém, Pará, Brazil.
Jorge das Dores RissinoLaboratório de Citogenética, ICB, Universidade Federal do Pará, Belém, Pará, Brazil.
Patricia Caroline Mary O'BrienCambridge Resource Centre for Comparative Genomics, University of Cambridge, Cambridge, United Kingdom.
Fengtang YangCytogenetics Facility, Wellcome Trust Sanger Institute, Cambridge, United Kingdom.
Malcolm Andrew Ferguson-SmithCambridge Resource Centre for Comparative Genomics, University of Cambridge, Cambridge, United Kingdom.
Julio Cesar PieczarkaLaboratório de Citogenética, ICB, Universidade Federal do Pará, Belém, Pará, Brazil; CNPQ Researcher, Belém, Pará, Brazil.
Universidade Federal do Pará · BRUniversity of Cambridge · GBNational Council for Scientific and Technological Development · BRUniversidade Federal do Oeste do Pará · BRWellcome Sanger Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The subfamily Phyllostominae comprises taxa with a variety of feeding strategies. From the cytogenetic point of view, Phyllostominae shows different rates of chromosomal evolution between genera, with Phyllostomus hastatus probably retaining the ancestral karyotype for the subfamily. Since chromosomal rearrangements occur rarely in the genome and have great value as phylogenetic markers and in taxonomic characterization, we analyzed three species: Lophostoma silvicola (LSI), Phyllostomus discolor (PDI) and Tonatia saurophila (TSA), representing the tribe Phyllostomini, collected in the Amazon region, by classic and molecular cytogenetic techniques in order to reconstruct the phylogenetic relationships within this tribe. LSA has a karyotype of 2n=34 and FN=60, PDI has 2n=32 and FN=60 and TSA has 2n=16 and FN=20. Comparative analysis using G-banding and chromosome painting show that the karyotypic complement of TSA is highly rearranged relative to LSI and PHA, while LSI, PHA and PDI have similar karyotypes, differing by only three chromosome pairs. Nearly all chromosomes of PDI and PHA were conserved in toto, except for chromosome 15 that was changed by a pericentric inversion. A strongly supported phylogeny (bootstrap=100 and Bremer=10 steps), confirms the monophyly of Phyllostomini. In agreement with molecular topologies, TSA was in the basal position, while PHA and LSI formed sister taxa. A few ancestral syntenies are conserved without rearrangements and most associations are autapomorphic traits for Tonatia or plesiomorphic for the three genera analyzed here. The karyotype of TSA is highly derived in relation to that of other phyllostomid bats, differing from the supposed ancestral karyotype of Phyllostomidae by multiple rearrangements. Phylogenies based on chromosomal data are independent evidence for the monophyly of tribe Phyllostomini as determined by molecular topologies and provide additional support for the paraphyly of the genus Tonatia by the exclusion of the genus Lophostoma.

Indexed as

Chromosome BandingPhylogenyAnimalsBiological EvolutionBrazilChiropteraChromosome PaintingHumansPopulation GroupsSpecies Specificity

Identifiers

PMID25806812
PMCPMC4373847
OpenAlexW2046829664

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.