Evidence map›Paper›PMID 25806539›Full record

ArticlePLoS genetics2015

A cascade of iron-containing proteins governs the genetic iron starvation response to promote iron uptake and inhibit iron storage in fission yeast.

Javier Encinar del Dedo, Natalia Gabrielli, Mercè Carmona, José Ayté, Elena Hidalgo

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Review
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  6. Virulence ofInsects · 2023
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  8. Frontiers in genetics · 2022
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  9. Article
  10. Review
  11. Article
  12. Review
  13. Cellular quiescence in budding yeast.Yeast (Chichester, England) · 2021
    Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Javier Encinar del DedoOxidative Stress and Cell Cycle Group, Universitat Pompeu Fabra, Barcelona, Spain.
Natalia GabrielliOxidative Stress and Cell Cycle Group, Universitat Pompeu Fabra, Barcelona, Spain.
Mercè CarmonaOxidative Stress and Cell Cycle Group, Universitat Pompeu Fabra, Barcelona, Spain.
José AytéOxidative Stress and Cell Cycle Group, Universitat Pompeu Fabra, Barcelona, Spain.
Elena HidalgoOxidative Stress and Cell Cycle Group, Universitat Pompeu Fabra, Barcelona, Spain.
Pompeu Fabra University · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Iron is an essential cofactor, but it is also toxic at high levels. In Schizosaccharomyces pombe, the sensor glutaredoxin Grx4 guides the activity of the repressors Php4 and Fep1 to mediate a complex transcriptional response to iron deprivation: activation of Php4 and inactivation of Fep1 leads to inhibition of iron usage/storage, and to promotion of iron import, respectively. However, the molecular events ruling the activity of this double-branched pathway remained elusive. We show here that Grx4 incorporates a glutathione-containing iron-sulfur cluster, alone or forming a heterodimer with the BolA-like protein Fra2. Our genetic study demonstrates that Grx4-Fra2, but not Fep1 nor Php4, participates not only in iron starvation signaling but also in iron-related aerobic metabolism. Iron-containing Grx4 binds and inactivates the Php4 repressor; upon iron deprivation, the cluster in Grx4 is probably disassembled, the proteins dissociate, and Php4 accumulates at the nucleus and represses iron consumption genes. Fep1 is also an iron-containing protein, and the tightly bound iron is required for transcriptional repression. Our data suggest that the cluster-containing Grx4-Fra2 heterodimer constitutively binds to Fep1, and upon iron deprivation the disassembly of the iron cluster between Grx4 and Fra2 promotes reverse metal transfer from Fep1 to Grx4-Fra2, and de-repression of iron-import genes. Our genetic and biochemical study demonstrates that the glutaredoxin Grx4 independently governs the Php4 and Fep1 repressors through metal transfer. Whereas iron loss from Grx4 seems to be sufficient to release Php4 and allow its nuclear accumulation, total or partial disassembly of the Grx4-Fra2 cluster actively participates in iron-containing Fep1 activation by sequestering its iron and decreasing its interaction with promoters.

Indexed as

CCAAT-Binding FactorFos-Related Antigen-2GATA Transcription FactorsGene Expression Regulation, FungalGlutaredoxinsGlutathioneIronPromoter Regions, GeneticSchizosaccharomycesSchizosaccharomyces pombe ProteinsSignal TransductionStarvationCCAAT-Binding FactorFep1 protein, S pombeFos-Related Antigen-2Fra2 protein, S pombeGATA Transcription FactorsGlutaredoxinsGlutathioneGRX4 protein, S pombeIronPhp4 protein, S pombeSchizosaccharomyces pombe Proteins

Identifiers

PMID25806539
PMCPMC4373815
OpenAlexW2159549782

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.