Evidence map›Paper›PMID 25804821›Full record

ReviewPlant science : an international journal of experimental plant biology2015

Destructuring plant biomass: focus on fungal and extremophilic cell wall hydrolases.

Gea Guerriero, Jean-Francois Hausman, Joseph Strauss, Haluk Ertan, Khawar Sohail Siddiqui

Abstract readReview
In one paragraph

Review in Plant science : an international journal of experimental plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Utilization of ferulic acid inFrontiers in fungal biology · 2022
    Article
  9. Article
  10. Article
  11. Review
  12. XynDZ5: A New Thermostable GH10 Xylanase.Frontiers in microbiology · 2020
    Article
  13. Article
  14. Fungal evolution: major ecological adaptations and evolutionary transitions.Biological reviews of the Cambridge Philosophical Society · 2019
    Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 5 countries.

Gea GuerrieroEnvironmental Research and Innovation (ERIN), Luxembourg Institute of Science and Technology (LIST), Esch/Alzette, Luxembourg. Electronic address: gea.guerriero@list.lu.
Jean-Francois HausmanEnvironmental Research and Innovation (ERIN), Luxembourg Institute of Science and Technology (LIST), Esch/Alzette, Luxembourg.
Joseph StraussDepartment of Applied Genetics and Cell Biology, Fungal Genetics and Genomics Unit, University of Natural Resources and Life Sciences Vienna (BOKU), University and Research Center Campus Tulln-Technopol, Tulln/Donau, Austria; Health and Environment Department, Austrian Institute of Technology GmbH - AIT, University and Research Center Campus Tulln-Technopol, Tulln/Donau, Austria.
Haluk ErtanSchool of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, Australia; Department of Molecular Biology and Genetics, Istanbul University, Turkey.
Khawar Sohail SiddiquiBiology Department, King Fahd University of Petroleum and Minerals (KFUPM), Dhahran, Saudi Arabia. Electronic address: ksiddiqui@kfupm.edu.sa.
Luxembourg Institute of Science and Technology · LUAustrian Institute of Technology · ATKing Fahd University of Petroleum and Minerals · SAUNSW Sydney · AU

Funding

Austrian Science Fund FWF M 1315
6 · The paper itself

Abstract

The use of plant biomass as feedstock for biomaterial and biofuel production is relevant in the current bio-based economy scenario of valorizing renewable resources. Fungi, which degrade complex and recalcitrant plant polymers, secrete different enzymes that hydrolyze plant cell wall polysaccharides. The present review discusses the current research trends on fungal, as well as extremophilic cell wall hydrolases that can withstand extreme physico-chemical conditions required in efficient industrial processes. Secretomes of fungi from the phyla Ascomycota, Basidiomycota, Zygomycota and Neocallimastigomycota are presented along with metabolic cues (nutrient sensing, coordination of carbon and nitrogen metabolism) affecting their composition. We conclude the review by suggesting further research avenues focused on the one hand on a comprehensive analysis of the physiology and epigenetics underlying cell wall degrading enzyme production in fungi and on the other hand on the analysis of proteins with unknown function and metagenomics of extremophilic consortia. The current advances in consolidated bioprocessing, altered secretory pathways and creation of designer plants are also examined. Furthermore, recent developments in enhancing the activity, stability and reusability of enzymes based on synergistic, proximity and entropic effects, fusion enzymes, structure-guided recombination between homologous enzymes and magnetic enzymes are considered with a view to improving saccharification.

Indexed as

AscomycotaBasidiomycotaBiomassCell WallFungal ProteinsFungiHydrolasesPlantsFungal ProteinsHydrolasesCarbohydrate-active enzymesExtremozymesFungal secretomeLignocellulosic biomassSaccharificationSynergistic activation

Identifiers

PMID25804821
PMCPMC4937988
OpenAlexW2057249233

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.