Evidence map›Paper›PMID 25802479›Full record

ArticleDisease markers2015

Identification of differentially expressed genes associated with prognosis of B acute lymphoblastic leukemia.

Idalia Garza-Veloz, Margarita L Martinez-Fierro, Jose Carlos Jaime-Perez, Karol Carrillo-Sanchez, Maria Guadalupe Ramos-Del Hoyo, Angel Lugo-Trampe, Augusto Rojas-Martinez, Cesar Homero Gutierrez-Aguirre, Oscar Gonzalez-Llano, Rosario Salazar-Riojas and 3 more

Registry-linked trialOpen access · hybridAbstract read
In one paragraph

Article in Disease markers, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05592470 (The Copper Metabolism MURR1 Domain 7), which is not on this map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05592470 unknown statusnot on this mapstarted 2022, after this paper: background citation

The Copper Metabolism MURR1 Domain 7 (COMMD7) Gene Expression in Acute Lymphoblastic Leukemia

TypeobservationalSponsorAssiut UniversityRan2022 to 2024Enrolled102ConditionsALLArmsReverse transcription-quantitative polymerase chain reaction (RT-qPCR).
3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Prevalence ofFrontiers in pediatrics · 2024
    Article
  5. Article
  6. NovelMediterranean journal of hematology and infectious diseases · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Idalia Garza-VelozDepartamento de Bioquimica y Medicina Molecular, Facultad de Medicina, Universidad Autonoma de Nuevo Leon, Avenida F. I. Madero, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico ; Molecular Medicine Laboratory, Unidad Academica de Medicina Humana y Ciencias de la Salud, Universidad Autonoma de Zacatecas, Carretera Zacatecas-Guadalajara Km 6, 98160 Ejido la Escondida, ZAC, Mexico.ORCID 0000-0002-6307-1696
Margarita L Martinez-FierroMolecular Medicine Laboratory, Unidad Academica de Medicina Humana y Ciencias de la Salud, Universidad Autonoma de Zacatecas, Carretera Zacatecas-Guadalajara Km 6, 98160 Ejido la Escondida, ZAC, Mexico.ORCID 0000-0003-1478-9068
Jose Carlos Jaime-PerezServicio de Hematologia, Hospital Universitario "Jose Eleuterio Gonzalez", Universidad Autonoma de Nuevo Leon, Avenida F. I. Madero, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico.
Karol Carrillo-SanchezInstituto Nacional de Medicina Genomica (INMEGEN), Periferico Sur No. 4809, Col. Arenal Tepepan, Delegacion Tlalpan, 14610 Mexico, DF, Mexico.
Maria Guadalupe Ramos-Del HoyoMolecular Medicine Laboratory, Unidad Academica de Medicina Humana y Ciencias de la Salud, Universidad Autonoma de Zacatecas, Carretera Zacatecas-Guadalajara Km 6, 98160 Ejido la Escondida, ZAC, Mexico.
Angel Lugo-TrampeMesoamerican Center of Public Health Studies and Disasters (CEMESAD), Universidad Autonoma de Chiapas (UNACH), Avenida Pista Principal esq Pista Secundaria, S/N, 30798 Tapachula, CHIS, Mexico.
Augusto Rojas-MartinezDepartamento de Bioquimica y Medicina Molecular, Facultad de Medicina, Universidad Autonoma de Nuevo Leon, Avenida F. I. Madero, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico ; Centro de Investigacion y Desarrollo en Ciencias de la Salud, Universidad Autonoma de Nuevo Leon, Carlos Canseco, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico.ORCID 0000-0003-3765-6778
Cesar Homero Gutierrez-AguirreServicio de Hematologia, Hospital Universitario "Jose Eleuterio Gonzalez", Universidad Autonoma de Nuevo Leon, Avenida F. I. Madero, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico.
Oscar Gonzalez-LlanoServicio de Hematologia, Hospital Universitario "Jose Eleuterio Gonzalez", Universidad Autonoma de Nuevo Leon, Avenida F. I. Madero, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico.
Rosario Salazar-RiojasServicio de Hematologia, Hospital Universitario "Jose Eleuterio Gonzalez", Universidad Autonoma de Nuevo Leon, Avenida F. I. Madero, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico.
Alfredo Hidalgo-MirandaInstituto Nacional de Medicina Genomica (INMEGEN), Periferico Sur No. 4809, Col. Arenal Tepepan, Delegacion Tlalpan, 14610 Mexico, DF, Mexico.
David Gomez-AlmaguerServicio de Hematologia, Hospital Universitario "Jose Eleuterio Gonzalez", Universidad Autonoma de Nuevo Leon, Avenida F. I. Madero, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico.
Rocio Ortiz-LopezDepartamento de Bioquimica y Medicina Molecular, Facultad de Medicina, Universidad Autonoma de Nuevo Leon, Avenida F. I. Madero, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico ; Centro de Investigacion y Desarrollo en Ciencias de la Salud, Universidad Autonoma de Nuevo Leon, Carlos Canseco, S/N, Col. Mitras Centro, 64460 Monterrey, NL, Mexico.ORCID 0000-0002-7783-026X
Universidad Autónoma de Nuevo León · MXNational Institute of Genomic Medicine · MXUniversidad Autónoma de Zacatecas "Francisco García Salinas" · MXUniversidad Autónoma de Chiapas · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAcute lymphoblastic leukemia type B (B-ALL) is a neoplastic disorder with high mortality rates. The aim of this study was to validate the expression profile of 45 genes associated with signaling pathways involved in leukemia and to evaluate their association with the prognosis of B-ALL.

methods219 samples of peripheral blood mononuclear cells obtained from 73 B-ALL patients were studied at diagnosis, four, and eight weeks after starting treatment. Gene expression was analyzed by quantitative real-time polymerase chain reaction.

resultsNormalized delta Cq values of 23 genes showed differences between B-ALL and controls at diagnosis time (P values < 0.05). There were significant associations between B-ALL patients relapse/death and the expression levels of IL2RA, SORT1, DEFA1, and FLT3 genes at least in one of the times evaluated (P values < 0.05 and odds ratio ranges: 3.73-27). The association between FLT3 deregulation and relapse/death was a constant in the times studied and their overexpression significantly increased the odds of relapse/death in a range of 3.73 and 6.05 among study population (P values < 0.05).

conclusionsOverexpression of FLT3 and DEFA1 genes retained independent prognostic significance for B-ALL outcome, reflected as increased risks of relapse/death among the study population.

Indexed as

Adaptor Proteins, Vesicular Transportalpha-DefensinsBiomarkers, Tumorfms-Like Tyrosine Kinase 3Interleukin-2 Receptor alpha SubunitLeukemia, B-CellPrecursor Cell Lymphoblastic Leukemia-LymphomaAdolescentAdultCase-Control StudiesChildChild, PreschoolFemaleHumansInfantMaleAdaptor Proteins, Vesicular Transportalpha-DefensinsBiomarkers, TumorFLT3 protein, humanfms-Like Tyrosine Kinase 3human neutrophil peptide 1IL2RA protein, humanInterleukin-2 Receptor alpha SubunitSortilin

Identifiers

PMID25802479
PMCPMC4354728
OpenAlexW1985704627

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.