Evidence map›Paper›PMID 25802329›Full record

ArticleThe Journal of biological chemistry2015

Activity of a bacterial cell envelope stress response is controlled by the interaction of a protein binding domain with different partners.

Josué Flores-Kim, Andrew J Darwin

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Josué Flores-KimFrom the Department of Microbiology, New York University School of Medicine, New York, New York 10016.
Andrew J DarwinFrom the Department of Microbiology, New York University School of Medicine, New York, New York 10016 andrew.darwin@med.nyu.edu.
New York University · US

Funding

The Psp response of Yersinia enterocoliticaR01AI052148 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI DARWIN, ANDREW J. · 2003 to 2017
$5.0M
NIAID NIH HHS R01 AI052148NIAID NIH HHS R01AI052148
6 · The paper itself

Abstract

The bacterial phage shock protein (Psp) system is a highly conserved cell envelope stress response required for virulence in Yersinia enterocolitica and Salmonella enterica. In non-inducing conditions the transcription factor PspF is inhibited by an interaction with PspA. In contrast, PspA associates with the cytoplasmic membrane proteins PspBC during inducing conditions. This has led to the proposal that PspBC exists in an OFF state, which cannot recruit PspA, or an ON state, which can. However, nothing was known about the difference between these two states. Here, we provide evidence that it is the C-terminal domain of Y. enterocolitica PspC (PspC(CT)) that interacts directly with PspA, both in vivo and in vitro. Site-specific photocross-linking revealed that this interaction occurred only during Psp-inducing conditions in vivo. Importantly, we have also discovered that PspC(CT) can interact with the C-terminal domain of PspB (PspC(CT)·PspB(CT)). However, the PspC(CT)·PspB(CT) and PspC(CT)·PspA interactions were mutually exclusive in vitro. Furthermore, in vivo, PspC(CT) contacted PspB(CT) in the OFF state, whereas it contacted PspA in the ON state. These findings provide the first description of the previously proposed PspBC OFF and ON states and reveal that the regulatory switch is centered on a PspC(CT) partner-switching mechanism.

Indexed as

Stress, PhysiologicalBacterial ProteinsCytoplasmHeat-Shock ProteinsModels, MolecularProtein BindingProtein Structure, TertiarySalmonella entericaSignal TransductionYersinia enterocoliticaBacterial ProteinsHeat-Shock Proteinsphage shock protein, BacteriaBacterial Signal TransductionGene RegulationMembraneProtein Cross-linkingProtein-Protein InteractionStress Response

Identifiers

PMID25802329
PMCPMC4416846
OpenAlexW2052177111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.