Evidence map›Paper›PMID 25802094›Full record

ArticleTrends in plant science2015

Natural variation in transcriptional rhythms modulates photoperiodic responses.

Akane Kubota, Jae Sung Shim, Takato Imaizumi

Abstract read
In one paragraph

Article in Trends in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Akane KubotaDepartment of Biology, University of Washington, Seattle, WA 98195-1800, USA.
Jae Sung ShimDepartment of Biology, University of Washington, Seattle, WA 98195-1800, USA.
Takato ImaizumiDepartment of Biology, University of Washington, Seattle, WA 98195-1800, USA. Electronic address: takato@u.washington.edu.

Funding

Molecular Mechanisms of Seasonal Time MeasurementR01GM079712 · NIGMS · UNIVERSITY OF WASHINGTON · PI IMAIZUMI, TAKATO · 2007 to 2022
$3.5M
NIGMS NIH HHS GM079712NIGMS NIH HHS R01 GM079712
6 · The paper itself

Abstract

Recent studies have demonstrated that allelic variation in daily expression profiles of the GIGANTEA gene may account for the variance in plant growth in different accessions. Studying natural variation in daily transcriptional patterns of circadian-clock regulated genes provides new insights into plant adaptive strategies to different geographical regions.

Indexed as

PhotoperiodArabidopsis ProteinsCircadian ClocksCircadian RhythmGene Expression Regulation, PlantQuantitative Trait LociTranscriptomeArabidopsis ProteinsGI protein, Arabidopsiscircadian clockgene expression profilesluciferase bioluminescence imagingnatural variationquantitative trait loci

Identifiers

PMID25802094
PMCPMC4420661

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.