Evidence map›Paper›PMID 25802007›Full record

ArticleProtoplasma2016

Physiological performance and differential expression profiling of genes associated with drought tolerance in root tissue of four contrasting varieties of two Gossypium species.

Ruchi Singh, Neha Pandey, Anil Kumar, Pramod A Shirke

Abstract read
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In one paragraph

Article in Protoplasma, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Whole Genome Analysis of Cyclin Dependent Kinase (International journal of molecular sciences · 2018
    Article
  8. Article
  9. Physiological performance of two contrasting rice varieties under water stress.Physiology and molecular biology of plants : an international journal of functional plant biology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ruchi SinghPlant Physiology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India.
Neha PandeyPlant Molecular Biology and Genetic Engineering Division, CSIR-National Botanical Research Institute, Lucknow, 226001, India.
Anil KumarPlant Physiology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India.
Pramod A ShirkePlant Physiology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India. pashirke@nbri.res.in.
National Botanical Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Root growth in drying soil is generally limited by a combination of mechanical impedance and water stress. As the major function of root tissue is water and nutrient uptake, so it imparts an important role in plant growth and stress management. Previously, we have studied physiological performance and expression profiling of gene associated with drought tolerance in leaf tissue of four cotton varieties. Here, we have further continued our studies with the root tissue of these varieties. The Gossypium hirsutum species JKC-770 is drought-tolerant and KC-2 is drought-sensitive, while Gossypium herbaceum species JKC-717 is drought-tolerant and RAHS-187 is drought-sensitive. JKC-770 and JKC-717 the drought-tolerant varieties showed a comparatively high glutathione-S-transferase, superoxide dismutase, proline along with their gene expression, and low malondialdehyde content indicating low membrane damage and better antioxidative defense under drought condition. The expression levels of cellulose synthase, xyloglucan:xyloglucosyl transferase, and glycosyl hydrolases suggest modulation in cell wall structure and partitioning of sugars towards osmoprotectants instead of cell wall biosynthesis in tolerant varieties. Heat shock proteins and serine/threonine protein phosphotases show upregulation under drought condition, which are responsible for temperature tolerance and protein phosphorylation, respectively. These effects many metabolic processes and may be playing a key role in drought tolerance and adaptability of JKC-770 towards drought tolerance. The long-term water use efficiency (WUE) estimated in terms of carbon isotope discrimination (∆(13)C) in the root tissues showed maximum depletion in the ∆(13)C values in JKC-770 variety, while minimum in RAHS-187 under drought stress with reference to their respective control, suggesting a high WUE in JKC-770 variety.

Indexed as

DroughtsGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantAdaptation, PhysiologicalBiomassCarbonCarbon Isotopesgamma-Aminobutyric AcidGossypiumLipid PeroxidationMannitolMetabolomeNitrogenOsmosisPlant RootsCarbonCarbon Isotopesgamma-Aminobutyric AcidMannitolNitrogenProlineSterolsSuperoxide DismutaseCarbon isotope discriminationCottonDroughtGene expressionMetabolitesWater use efficiency

Identifiers

PMID25802007
OpenAlexW1996013113

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.