Evidence map›Paper›PMID 25801292›Full record

ArticleFree radical biology & medicine2015

Detection of oxidative stress-induced carbonylation in live mammalian cells.

Kamalika Mukherjee, Tak Ian Chio, Dan L Sackett, Susan L Bane

Abstract read
In one paragraph

Article in Free radical biology & medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 42 citations in OpenAlex.

  1. In vitro effects of Taurine on Taxol-induced mitochondrial dysfunction.Proceedings of SPIE--the International Society for Optical Engineering · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Kamalika MukherjeeDepartment of Chemistry, Binghamton University, State University of New York, Binghamton, NY 13902, USA.
Tak Ian ChioDepartment of Chemistry, Binghamton University, State University of New York, Binghamton, NY 13902, USA.
Dan L SackettProgram in Physical Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Susan L BaneDepartment of Chemistry, Binghamton University, State University of New York, Binghamton, NY 13902, USA. Electronic address: sbane@binghamton.edu.
Binghamton University · USNational Institutes of Health · US

Funding

Microtubule regulation by small molecules.ZIAHD008765 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI SACKETT, DAN L · 2009 to 2025
$8.9M
Identifying Proteins in the Microtubule LumenR15GM102867 · NIGMS · STATE UNIVERSITY OF NY,BINGHAMTON · PI BANE, SUSAN L · 2012 to 2012
$321k
NIGMS NIH HHS R15 GM102867NIGMS NIH HHS R15GM-102867
6 · The paper itself

Abstract

Oxidative stress is often associated with etiology and/or progression of disease conditions, such as cancer, neurodegenerative diseases, and diabetes. At the cellular level, oxidative stress induces carbonylation of biomolecules such as lipids, proteins, and DNA. The presence of carbonyl-containing biomolecules as a hallmark of these diseases provides a suitable target for diagnostic detection. Here, a simple, robust method for detecting cellular aldehydes and ketones in live cells using a fluorophore is presented. A hydrazine-functionalized synthetic fluorophore serves as an efficient nucleophile that rapidly reacts with reactive carbonyls in the cellular milieu. The product thus formed exhibits a wavelength shift in the emission maximum accompanied by an increase in emission intensity. The photochemical characteristics of the fluorophore enable the identification of the fluorophore-conjugated cellular biomolecules in the presence of unreacted dye, eliminating the need for removal of excess fluorophore. Moreover, this fluorophore is found to be nontoxic and is thus appropriate for live cell analysis. Utility of the probe is demonstrated in two cell lines, PC3 and A549. Carbonylation resulting from serum starvation and hydrogen peroxide-induced stress is detected in both cell lines using fluorescence microscopy and a fluorescence plate reader. The fluorescent signal originates from carbonylated proteins and lipids but not from oxidized DNA, and the majority of the fluorescence signal (>60%) is attributed to fluorophore-conjugated lipid oxidation products. This method should be useful for detecting cellular carbonylation in a high-content assay or high-throughput assay format.

Indexed as

Protein CarbonylationCell Line, TumorCulture Media, Serum-FreeFluorescent DyesHumansHydrazinesHydrogen PeroxideOxidantsOxidative StressCulture Media, Serum-FreeFluorescent DyesHydrazinesHydrogen PeroxideOxidantsBiomolecule carbonylationFluorophoreHydrazineLive cellsMicroscopyOxidative stressPlate reader

Identifiers

PMID25801292
PMCPMC4457688
OpenAlexW2038392459

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.