Evidence map›Paper›PMID 25799165›Full record

ArticlePloS one2015

The human cytomegalovirus UL133-138 gene locus attenuates the lytic viral cycle in fibroblasts.

Nirmal Dutta, Philip Lashmit, Jinxiang Yuan, Jeffery Meier, Mark F Stinski

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Human cytomegalovirus and neonatal infection.Current research in microbial sciences · 2024
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Control of Cytokines in Latent Cytomegalovirus Infection.Pathogens (Basel, Switzerland) · 2020
    Review
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Nirmal DuttaDepartment of Internal Medicine, University of Iowa, Iowa City, United States of America.
Philip LashmitCenter for Biocatalysis and Bioprocessing, University of Iowa, Iowa City, United States of America.
Jinxiang YuanDepartment of Internal Medicine, University of Iowa, Iowa City, United States of America.
Jeffery MeierDepartment of Internal Medicine, University of Iowa, Iowa City, United States of America; Iowa Veterans Affairs Healthcare System, Iowa City, United States of America.
Mark F StinskiDepartment of Microbiology, University of Iowa, Iowa City, United States of America.
University of Iowa · US

Funding

THE GENES THAT REGULATE HUMAN CYTOMEGALOVIRUS EXPRESSIONR01AI013562 · NIAID · UNIVERSITY OF IOWA · PI STINSKI, MARK F · 1985 to 2005
$1.4M
REGULATION OF HUMAN CYTOMEGALOVIRUS GENE EXPRESSIONR21AI013562 · NIAID · UNIVERSITY OF IOWA · PI STINSKI, MARK F · 2000 to 2000
$294k
BLRD VA I01 BX001107NIAID NIH HHS AI-13562NIAID NIH HHS R01 AI013562NIAID NIH HHS R21 AI013562
6 · The paper itself

Abstract

The genomes of HCMV clinical strains (e.g. FIX, TR, PH, etc) contain a 15 kb region that encodes 20 putative ORFs. The region, termed ULb', is lost after serial passage of virus in human foreskin fibroblast (HFF) cell culture. Compared to clinical strains, laboratory strains replicate faster and to higher titers of infectious virus. We made recombinant viruses with 22, 14, or 7 ORFs deleted from the ULb' region using FIX and TR as model clinical strains. We also introduced a stop codon into single ORFs between UL133 and UL138 to prevent protein expression. All deletions within ULb' and all stop codon mutants within the UL133 to UL138 region increased to varying degrees, viral major immediate early RNA and protein, DNA, and cell-free infectious virus compared to the wild type viruses. The wild type viral proteins slowed down the viral replication process along with cell-free infectious virus release from human fibroblast cells.

Indexed as

Cells, CulturedCodon, TerminatorCytomegalovirusDNA ReplicationDNA, ViralFibroblastsGene DeletionGene ExpressionGene OrderGenes, Immediate-EarlyGenome, ViralHumansMutationOpen Reading FramesRecombination, GeneticTranscription, GeneticCodon, TerminatorDNA, ViralViral Proteins

Identifiers

PMID25799165
PMCPMC4370700
OpenAlexW1989108785

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.