Evidence map›Paper›PMID 25799047›Full record

ArticlePloS one2015

Homologous expression of the Caldicellulosiruptor bescii CelA reveals that the extracellular protein is glycosylated.

Daehwan Chung, Jenna Young, Yannick J Bomble, Todd A Vander Wall, Joseph Groom, Michael E Himmel, Janet Westpheling

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Characterization of the Biomass Degrading Enzyme GuxA fromInternational journal of molecular sciences · 2022
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  18. EngineeringBiotechnology for biofuels · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Daehwan ChungDepartment of Genetics, University of Georgia, Athens, Georgia, United States of America; The BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Jenna YoungDepartment of Genetics, University of Georgia, Athens, Georgia, United States of America; The BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Yannick J BombleBiosciences Center, National Renewable Energy Laboratory, Golden, Colorado, United States of America; The BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Todd A Vander WallBiosciences Center, National Renewable Energy Laboratory, Golden, Colorado, United States of America; The BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Joseph GroomDepartment of Genetics, University of Georgia, Athens, Georgia, United States of America; The BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Michael E HimmelBiosciences Center, National Renewable Energy Laboratory, Golden, Colorado, United States of America; The BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Janet WestphelingDepartment of Genetics, University of Georgia, Athens, Georgia, United States of America; The BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Oak Ridge National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Members of the bacterial genus Caldicellulosiruptor are the most thermophilic cellulolytic microbes described with ability to digest lignocellulosic biomass without conventional pretreatment. The cellulolytic ability of different species varies dramatically and correlates with the presence of the multimodular cellulase CelA, which contains both a glycoside hydrolase family 9 endoglucanase and a glycoside hydrolase family 48 exoglucanase known to be synergistic in their activity, connected by three cellulose-binding domains via linker peptides. This architecture exploits the cellulose surface ablation driven by its general cellulase processivity as well as excavates cavities into the surface of the substrate, revealing a novel paradigm for cellulase activity. We recently reported that a deletion of celA in C. bescii had a significant effect on its ability to utilize complex biomass. To analyze the structure and function of CelA and its role in biomass deconstruction, we constructed a new expression vector for C. bescii and were able, for the first time, to express significant quantities of full-length protein in vivo in the native host. The protein, which contains a Histidine tag, was active and excreted from the cell. Expression of CelA protein with and without its signal sequence allowed comparison of protein retained intracellularly to protein transported extracellularly. Analysis of protein in culture supernatants revealed that the extracellular CelA protein is glycosylated whereas the intracellular CelA is not, suggesting that either protein transport is required for this post-translational modification or that glycosylation is required for protein export. The mechanism and role of protein glycosylation in bacteria is poorly understood and the ability to express CelA in vivo in C. bescii will allow the study of the mechanism of protein glycosylation in this thermophile. It will also allow the study of glycosylation of CelA itself and its role in the structure and function of this important enzyme in biomass deconstruction.

Indexed as

Bacterial ProteinsBiomassCellulaseCelluloseGlycoside HydrolasesGlycosylationGram-Positive Endospore-Forming RodsHydrolysisProtein Processing, Post-TranslationalBacterial ProteinsCelA endoglucanaseCellulaseCelluloseGlycoside Hydrolases

Identifiers

PMID25799047
PMCPMC4370642
OpenAlexW2116581415

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.