Evidence map›Paper›PMID 25798436›Full record

ArticleFrontiers in public health2015

Survey and Rapid Detection of Bordetella pertussis in Clinical Samples Targeting the BP485 in China.

Wei Liu, Yinghua Xu, Derong Dong, Huan Li, Xiangna Zhao, Lili Li, Ying Zhang, Xiao Wei, Xuesong Wang, Simo Huang and 4 more

Abstract read
In one paragraph

Article in Frontiers in public health, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Laboratory tools for the direct detection of bacterial respiratory infections and antimicrobial resistance: a scoping review.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2024
    Article
  2. Article
  3. Article
  4. Large pertussis outbreak in rural Canada: Lessons learned from Haida Gwaii.Canadian family physician Medecin de famille canadien · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Wei LiuInstitute of Disease Control and Prevention, Academy of Military Medical Sciences , Beijing , China.
Yinghua XuNational Institutes for Food and Drug Control , Beijing , China.
Derong DongInstitute of Disease Control and Prevention, Academy of Military Medical Sciences , Beijing , China.
Huan LiInstitute of Disease Control and Prevention, Academy of Military Medical Sciences , Beijing , China.
Xiangna ZhaoInstitute of Disease Control and Prevention, Academy of Military Medical Sciences , Beijing , China.
Lili LiNational Institutes for Food and Drug Control , Beijing , China.
Ying ZhangNational Institutes for Food and Drug Control , Beijing , China.
Xiao WeiInstitute of Disease Control and Prevention, Academy of Military Medical Sciences , Beijing , China.
Xuesong WangInstitute of Disease Control and Prevention, Academy of Military Medical Sciences , Beijing , China.
Simo HuangInstitute of Disease Control and Prevention, Academy of Military Medical Sciences , Beijing , China.
Ming ZengNational Institutes for Food and Drug Control , Beijing , China.
Liuyu HuangInstitute of Disease Control and Prevention, Academy of Military Medical Sciences , Beijing , China.
Shumin ZhangNational Institutes for Food and Drug Control , Beijing , China.
Jing YuanInstitute of Disease Control and Prevention, Academy of Military Medical Sciences , Beijing , China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bordetella pertussis is an important human respiratory pathogen. Here, we describe a loop-mediated isothermal amplification (LAMP) method for the rapid detection of B. pertussis in clinical samples based on a visual test. The LAMP assay detected the BP485 target sequence within 60 min with a detection limit of 1.3 pg/μl, a 10-fold increase in sensitivity compared with conventional PCR. All 31 non-pertussis respiratory pathogens tested were negative for LAMP detection, indicating the high specificity of the primers for B. pertussis. To evaluate the application of the LAMP assay to clinical diagnosis, of 105 sputum and nasopharyngeal samples collected from the patients with suspected respiratory infections in China, a total of 12 B. pertussis isolates were identified from 33 positive samples detected by LAMP-based surveillance targeting BP485. Strikingly, a 4.5 months old baby and her mother were found to be infected with B. pertussis at the same time. All isolates belonged to different B. pertussis multilocus sequence typing groups with different alleles of the virulence-related genes including four alleles of ptxA, six of prn, four of tcfA, two of fim2, and three of fim3. The diversity of B. pertussis carrying toxin genes in clinical strains indicates a rapid and continuing evolution of B. pertussis. This combined with its high prevalence will make it difficult to control. In conclusion, we have developed a visual detection LAMP assay, which could be a useful tool for rapid B. pertussis detection, especially in situations where resources are poor and in point-of-care tests.

Indexed as

BP485B. pertussisLAMPprevalencerapid diagnosissensitivityspecificity

Identifiers

PMID25798436
PMCPMC4350411

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.