Evidence map›Paper›PMID 25798211›Full record

ArticleHereditary cancer in clinical practice2015

The c.470 T > C CHEK2 missense variant increases the risk of differentiated thyroid carcinoma in the Great Poland population.

Marta Kaczmarek-Ryś, Katarzyna Ziemnicka, Szymon T Hryhorowicz, Katarzyna Górczak, Justyna Hoppe-Gołębiewska, Marzena Skrzypczak-Zielińska, Michalina Tomys, Monika Gołąb, Malgorzata Szkudlarek, Bartłomiej Budny and 5 more

Open access · goldAbstract read
In one paragraph

Article in Hereditary cancer in clinical practice, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it, 36 citations in OpenAlex.

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  17. Disease spectrum of gastric cancer susceptibility genes.Medical oncology (Northwood, London, England) · 2021
    Article
  18. Incidence of theCancers · 2021
    Article
  19. Article
  20. Cells · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Marta Kaczmarek-Ryś *Institute of Human Genetics, Polish Academy of Sciences, Ul. Strzeszyńska 32, Poznań, 60-479 Poland.
Katarzyna Ziemnicka *Department of Endocrinology, Metabolism and Internal Diseases, University of Medical Sciences, Poznań, Poland.
Szymon T HryhorowiczInstitute of Human Genetics, Polish Academy of Sciences, Ul. Strzeszyńska 32, Poznań, 60-479 Poland.
Katarzyna GórczakDepartment of Mathematical and Statistical Methods, University of Life Sciences, Poznań, Poland.
Justyna Hoppe-GołębiewskaInstitute of Human Genetics, Polish Academy of Sciences, Ul. Strzeszyńska 32, Poznań, 60-479 Poland.
Marzena Skrzypczak-ZielińskaInstitute of Human Genetics, Polish Academy of Sciences, Ul. Strzeszyńska 32, Poznań, 60-479 Poland.
Michalina TomysInstitute for Applied Human Genetics and Oncogenetics, Zwenkau, Germany.
Monika GołąbDepartment of Endocrinology, Metabolism and Internal Diseases, University of Medical Sciences, Poznań, Poland.
Malgorzata SzkudlarekDepartment of Endocrinology, Metabolism and Internal Diseases, University of Medical Sciences, Poznań, Poland.
Bartłomiej BudnyDepartment of Endocrinology, Metabolism and Internal Diseases, University of Medical Sciences, Poznań, Poland.
Idzi SiatkowskiDepartment of Mathematical and Statistical Methods, University of Life Sciences, Poznań, Poland.
Paweł GutDepartment of Endocrinology, Metabolism and Internal Diseases, University of Medical Sciences, Poznań, Poland.
Marek RuchałaDepartment of Endocrinology, Metabolism and Internal Diseases, University of Medical Sciences, Poznań, Poland.
Ryszard SłomskiInstitute of Human Genetics, Polish Academy of Sciences, Ul. Strzeszyńska 32, Poznań, 60-479 Poland.
Andrzej PławskiInstitute of Human Genetics, Polish Academy of Sciences, Ul. Strzeszyńska 32, Poznań, 60-479 Poland.
Poznan University of Medical Sciences · PLPolish Academy of Sciences · PLUniversity of Life Sciences in Poznań · PLInstitute of Human Genetics · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDifferentiated thyroid carcinoma (DTC) originates from thyroid follicular epithelial cells and belongs to a group of slowly progressing tumors with a relatively good prognosis. However, recurrences and metastases are a serious problem in advanced stages. Furthermore, progression from a well differentiated thyroid carcinoma to an aggressive anaplastic one is possible. The majority of differentiated thyroid carcinomas are sporadic but a few alleles increasing the cancer risk are known. One of them is the c.470 T > C (p.I157T, rs17879961) missense substitution in the CHEK2 gene. AIM OF THE STUDY: The aim of this study was to investigate whether this specific CHEK2 alteration, c.470 T > C, predisposes the Great Poland (Wielkopolska) population to thyroid cancer.

methods602 differentiated thyroid carcinoma patients and 829 controls randomly selected from population were genotyped for the presence of the c.470C allele using pyrosequencing. Hardy-Weinberg Equilibrium (HWE) was tested for both groups by chi-square distribution and Fisher's exact test. The odds ratios (ORs), 95% confidence intervals (CIs), and p-values were calculated using the R software.

resultsThe results of genotyping showed the presence of the c.470C allele in 51 patients with a frequency of 4.49%, while in a controls in 42 patients with a frequency of 2.53%. We demonstrated that in the Great Poland population the c.470C CHEK2 variant increases the risk of developing differentiated thyroid cancer almost twice (OR = 1.81, p = 0.004). The risk of papillary thyroid carcinoma in female patients homozygous for the c.470C allele was shown to increase almost 13-fold (OR = 12.81, p = 0.019).

conclusionsIdentification of c.470C CHEK2 gene variant ought to be taken into account by healthcare policymakers. Future well-designed and larger population studies are of great value in confirming these findings. Moreover, a combination of genetic factors together with environmental exposures should also be considered.

Indexed as

Cancer risk factorsCHEK2 gene sequence variantsDifferentiated thyroid carcinomaGenotyping

Identifiers

PMID25798211
PMCPMC4367841
OpenAlexW2149625293

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.