Evidence map›Paper›PMID 25798088›Full record

ArticleFrontiers in cellular neuroscience2015

GluA2 is rapidly edited at the Q/R site during neural differentiation in vitro.

Svenja Pachernegg, Yvonne Münster, Elke Muth-Köhne, Gloria Fuhrmann, Michael Hollmann

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. AMPA Receptor Function in Hypothalamic Synapses.Frontiers in synaptic neuroscience · 2022
    Review
  9. Review
  10. Article
  11. Explaining Pathogenicity of Congenital Zika and Guillain-Barré Syndromes: Does Dysregulation of RNA Editing Play a Role?BioEssays : news and reviews in molecular, cellular and developmental biology · 2019
    Article
  12. Dysregulated CaFrontiers in synaptic neuroscience · 2019
    Review
  13. Article
  14. Article
  15. Review
  16. R/G editing in GluA2RScientific reports · 2017
    Article
  17. Article
  18. AMPA glutamate receptors are required for sensory-organ formation and morphogenesis in the basal chordate.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Svenja PacherneggDepartment of Biochemistry I - Receptor Biochemistry, Ruhr University Bochum Bochum, Germany ; International Graduate School of Neuroscience, Ruhr University Bochum Bochum, Germany ; Ruhr University Research School, Ruhr University Bochum Bochum, Germany.
Yvonne MünsterDepartment of Biochemistry I - Receptor Biochemistry, Ruhr University Bochum Bochum, Germany.
Elke Muth-KöhneDepartment of Biochemistry I - Receptor Biochemistry, Ruhr University Bochum Bochum, Germany ; International Graduate School of Neuroscience, Ruhr University Bochum Bochum, Germany ; Ruhr University Research School, Ruhr University Bochum Bochum, Germany.
Gloria FuhrmannDepartment of Biochemistry I - Receptor Biochemistry, Ruhr University Bochum Bochum, Germany.
Michael HollmannDepartment of Biochemistry I - Receptor Biochemistry, Ruhr University Bochum Bochum, Germany.
Ruhr University Bochum · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The majority of AMPA receptors in the adult brain contain GluA2 subunits, which can be edited at the Q/R site, changing a glutamine to an arginine within the ion pore. Q/R editing renders AMPARs virtually Ca(2+)-impermeable, which is important for normal AMPA receptor function. Thus, all GluA2 subunits are Q/R-edited in the adult brain. However, it has remained controversial precisely when editing sets in during development. In the present study, we show that GluA2 mRNA is very rapidly Q/R-edited immediately after its appearance, which is after 4.5 days of differentiation from 46C embryonic stem cells (ESCs) to neuroepithelial precursor cells (NEPs). At this time point, most of the GluA2 transcripts were already edited, with only a small fraction remaining unedited, and half a day later all GluA2 transcripts were edited. This can be explained by the observation that the enzyme that Q/R-edits GluA2 transcripts, ADAR2, is already expressed in the cell well before GluA2 transcription starts, and later is not significantly upregulated any more. Editing at another site works differently: The R/G site within the ligand-binding domain was never completely edited at any of the developmental stages tested, and the enzyme that performs this editing, ADAR1, was significantly upregulated during neural differentiation. This confirms previous data suggesting that R/G editing, in contrast to Q/R editing, progresses gradually during development.

Indexed as

ADAR2editing assayESCsNEPsNSCsQ/R siteR/G siteRNA editing

Identifiers

PMID25798088
PMCPMC4350408
OpenAlexW2061685660

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.