Evidence map›Paper›PMID 25797254›Full record

ArticleOncotarget2015

Inactivation of bone morphogenetic protein 2 may predict clinical outcome and poor overall survival for renal cell carcinoma through epigenetic pathways.

Yozo Mitsui, Hiroshi Hirata, Naoko Arichi, Miho Hiraki, Hiroaki Yasumoto, Inik Chang, Shinichiro Fukuhara, Soichiro Yamamura, Varahram Shahryari, Guoren Deng and 5 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

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  10. The Role of DNA Methylation in Renal Cell Carcinoma.Molecular diagnosis & therapy · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Yozo MitsuiDepartment of Urology, Shimane University Faculty of Medicine, Enya-cho, Izumo, Japan.
Hiroshi HirataDepartment of Urology, San Francisco Veterans Affairs Medical Center and University of California San Francisco, San Francisco, California, USA.
Naoko ArichiDepartment of Urology, Shimane University Faculty of Medicine, Enya-cho, Izumo, Japan.
Miho HirakiDepartment of Urology, Shimane University Faculty of Medicine, Enya-cho, Izumo, Japan.
Hiroaki YasumotoDepartment of Urology, Shimane University Faculty of Medicine, Enya-cho, Izumo, Japan.
Inik ChangDepartment of Oral Biology, Yonsei University College of Densitry, Seoul, South Korea.
Shinichiro FukuharaDepartment of Urology, Osaka University Graduate School of Medicine, Suita, Japan.
Soichiro YamamuraDepartment of Urology, San Francisco Veterans Affairs Medical Center and University of California San Francisco, San Francisco, California, USA.
Varahram ShahryariDepartment of Urology, San Francisco Veterans Affairs Medical Center and University of California San Francisco, San Francisco, California, USA.
Guoren DengDepartment of Urology, San Francisco Veterans Affairs Medical Center and University of California San Francisco, San Francisco, California, USA.
Sharanjot SainiDepartment of Urology, San Francisco Veterans Affairs Medical Center and University of California San Francisco, San Francisco, California, USA.
Shahana MajidDepartment of Urology, San Francisco Veterans Affairs Medical Center and University of California San Francisco, San Francisco, California, USA.
Rajvir DahiyaDepartment of Urology, San Francisco Veterans Affairs Medical Center and University of California San Francisco, San Francisco, California, USA.
Yuichiro TanakaDepartment of Urology, San Francisco Veterans Affairs Medical Center and University of California San Francisco, San Francisco, California, USA.
Hiroaki ShiinaDepartment of Urology, Shimane University Faculty of Medicine, Enya-cho, Izumo, Japan.
San Francisco VA Medical Center · USShimane University · JPUniversity of California, San Francisco · USOsaka University · JPYonsei University · KR

Funding

Wnt antagonist genes in kidney tumor progression and metastasisR01CA130860 · NCI · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI DAHIYA, RAJVIR · 2008 to 2012
$3.0M
NCI NIH HHS R01 CA130860NCI NIH HHS R01CA130860
6 · The paper itself

Abstract

We investigated whether impaired regulation of bone morphogenetic protein-2 (BMP-2) via epigenetic pathways is associated with renal cell carcinoma (RCC) pathogenesis. Expression and CpG methylation of the BMP-2 gene were analyzed using RCC cell lines, and 96 matched RCC and normal renal tissues. We also performed functional analysis using BMP-2 restored RCC cells. A significant association of BMP-2 mRNA expression was also found with advanced tumor stage and lymph node involvement, while lower BMP-2 mRNA expression was significantly associated with poor overall survival after radical nephrectomy. In RCC cells, BMP-2 restoration significantly inhibited cell proliferation, migration, invasion, and colony formation. In addition, BMP-2 overexpression induced p21(WAF1/CIP1) and p27(KIP1) expression, and cellular apoptosis in RCC cells. BMP-2 mRNA expression was significantly enhanced in RCC cells by 5-aza-2'-deoxycitidine treatment. The prevalence of BMP-2 promoter methylation was significantly greater and BMP-2 mRNA expression was significantly lower in RCC samples as compared to normal kidney samples. Furthermore, a significant correlation was found between BMP-2 promoter methylation and mRNA transcription in tumors. Aberrant BMP-2 methylation and the resultant loss of BMP-2 expression may be a useful molecular marker for designing improved diagnostic and therapeutic strategies for RCC.

Indexed as

DNA MethylationGene Expression Regulation, NeoplasticAgedAntimetabolites, AntineoplasticApoptosisAzacitidineBone Morphogenetic Protein 2Carcinoma, Renal CellCell Line, TumorDecitabineDown-RegulationFemaleGenes, cdcHumansKidney NeoplasmsKidney TubulesAntimetabolites, AntineoplasticAzacitidineBMP2 protein, humanBone Morphogenetic Protein 2DecitabineNeoplasm ProteinsRecombinant Fusion ProteinsRNA, MessengerRNA, Neoplasmbone morphogenetic protein 2DNA methylationmolecular markerrenal cell carcinoma

Identifiers

PMID25797254
PMCPMC4496240
OpenAlexW1527324572

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.