Evidence map›Paper›PMID 25797072›Full record

ReviewExpert review of molecular diagnostics2015

Emerging technologies for studying DNA methylation for the molecular diagnosis of cancer.

Diego M Marzese, Dave Sb Hoon

Abstract readReview
In one paragraph

Review in Expert review of molecular diagnostics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Brain Tumor Classification by Methylation Profile.Journal of Korean medical science · 2023
    Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Hypermethylation ofFrontiers in cell and developmental biology · 2021
    Article
  10. Review
  11. Article
  12. Article
  13. Hypermethylation of theCancer management and research · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Implication of Reprimo and hMLH1 gene methylation in early diagnosis of gastric carcinoma.International journal of clinical and experimental pathology · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Diego M MarzeseDepartment of Molecular Oncology, Saint John's Health Center, John Wayne Cancer Institute, 2200 Santa Monica Blvd, Santa Monica, CA 90404, USA.
Dave Sb Hoon

Funding

SURGICAL ONCOLOGY WITH COMBINATION THERMO-CHEMOTHERAPYP01CA029605 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI COCHRAN, ALISTAIR JOHN · 1985 to 2013
$75.2M
Identification of Melanoma Brain Metastasis Tumor BiomarkersR01CA167967 · NCI · SAINT JOHN'S CANCER INSTITUTE · PI HOON, DAVE S B · 2013 to 2017
$1.9M
Predictive Epigenomic Biomarkers In Rectal Cancer Patients Receiving TreatmentR01CA171767 · NCI · SAINT JOHN'S CANCER INSTITUTE · PI HOON, DAVE S B · 2013 to 2017
$1.9M
NCI NIH HHS 1R01CA167967-01A1NCI NIH HHS P01 CA029605NCI NIH HHS P01CA029605NCI NIH HHS R01 CA167967NCI NIH HHS R01 CA171767
6 · The paper itself

Abstract

DNA methylation is an epigenetic mechanism that plays a key role in regulating gene expression and other functions. Although this modification is seen in different sequence contexts, the most frequently detected DNA methylation in mammals involves cytosine-guanine dinucleotides. Pathological alterations in DNA methylation patterns are described in a variety of human diseases, including cancer. Unlike genetic changes, DNA methylation is heavily influenced by subtle modifications in the cellular microenvironment. In all cancers, aberrant DNA methylation is involved in the alteration of a large number of oncological pathways with relevant theranostic utility. Several technologies for DNA methylation mapping have been developed recently and successfully applied in cancer studies. The scope of these technologies varies from assessing a single cytosine-guanine locus to genome-wide distribution of DNA methylation. Here, we review the strengths and weaknesses of these approaches in the context of clinical utility for the molecular diagnosis of human cancers.

Indexed as

DNA MethylationEpigenesis, GeneticMolecular Diagnostic TechniquesBiomarkers, TumorChromosome MappingEpigenomicsGene Expression ProfilingGene Expression Regulation, NeoplasticGenetic LociGenome-Wide Association StudyHumansNeoplasmsBiomarkers, Tumorcancer diagnosisDNA methylationepigenomicsmicroarraysequencing

Identifiers

PMID25797072
PMCPMC4422757

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.