Evidence map›Paper›PMID 25793756›Full record

ArticlePloS one2015

Identification and molecular characterization of the homogentisate pathway responsible for pyomelanin production, the major melanin constituents in Aeromonas media WS.

He Wang, Yunqian Qiao, Baozhong Chai, Chenxi Qiu, Xiangdong Chen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Mutation ofMicrobiology spectrum · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Melanin Produced bymSphere · 2021
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Pyomelanin-ProducingFrontiers in microbiology · 2021
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

He WangState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Yunqian QiaoState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Baozhong ChaiState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Chenxi QiuState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Xiangdong ChenState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China; Hubei Provincial Cooperative Innovation Center of Industrial Fermentation, Wuhan, China.
Wuhan University · CNCenter of Hubei Cooperative Innovation for Emissions Trading System · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pigmentation of many Aeromonas species has been thought to be due to the production of a L-DOPA (L-3,4-dihydroxyphenylalanine) based melanin. However, in this study we found that although L-DOPA synthesis occurs in the high-melanin-yielding Aeromonas media strain WS, it plays a minor, if any, role in pigmentation. Instead, the pigmentation of A. media strain WS is due to the production of pyomelanin through HGA (homogentisate). Gene products of phhA (encodes phenylalanine hydroxylase), tyrB and aspC (both encode aromatic amino acid aminotransferase), and hppD (encodes 4-hydroxyphenylpyruvate dioxygenase) constitute a linear pathway of converting phenylalanine to HGA and disruption of any one of these genes impairs or blocks pigmentation of A. media strain WS. This HGA biosynthesis pathway is widely distributed in Aeromonas, but HGA is only detectable in the cultures of pigmented Aeromonas species. Heterologous expression of HppD from both pigmented and non-pigmented Aeromonas species in E. coli leads to the production of pyomelanin and thus pigmentation, suggesting that most Aeromonas species have the critical enzymes to produce pyomelanin through HGA. Taken together, we have identified a widely conserved biosynthesis pathway of HGA based pyomelanin in Aeromonas that may be responsible for pigmentation of many Aeromonas species.

Indexed as

4-Hydroxyphenylpyruvate DioxygenaseAeromonasBiosynthetic PathwaysChromatography, High Pressure LiquidDNA Transposable ElementsGene Expression Regulation, BacterialGenes, BacterialGenetic TestingHomogentisic AcidLevodopaMelaninsMutagenesisPhenylpyruvic AcidsPigmentationTranscription, GeneticTyrosine4-Hydroxyphenylpyruvate Dioxygenase4-hydroxyphenylpyruvic acidDNA Transposable ElementsHomogentisic AcidLevodopaMelaninsPhenylpyruvic AcidspyomelaninTyrosine

Identifiers

PMID25793756
PMCPMC4368426
OpenAlexW2012578104

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.