Evidence map›Paper›PMID 25793277›Full record

ArticlePloS one2015

Genetic structure analysis of Spirometra erinaceieuropaei isolates from central and southern China.

Xi Zhang, Jing Cui, Li Na Liu, Peng Jiang, Han Wang, Xin Qi, Xing Qi Wu, Zhong Quan Wang

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Epidemiology, Diagnosis, and Prevention of Sparganosis in Asia.Animals : an open access journal from MDPI · 2022
    Review
  4. Case Report: Morphologic and Genetic Identification of Cerebral Sparganosis.The American journal of tropical medicine and hygiene · 2019
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xi ZhangDepartment of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China.
Jing CuiDepartment of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China.
Li Na LiuDepartment of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China.
Peng JiangDepartment of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China.
Han WangDepartment of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China.
Xin QiDepartment of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China.
Xing Qi WuDepartment of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China.
Zhong Quan WangDepartment of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSparganosis caused by invasion of the plerocercoid larvae (spargana) of Spirometra erinaceieuropaei have increased in recent years in China. However, the population genetic structure regarding this parasite is still unclear. In this study, we used the sequences of two mitochondrial genes cytochrome b (cytb) and cytochrome c oxidase subunit I (cox1) to analyze genetic variation and phylogeographic structure of the S. erinaceieuropaei populations. METHODOLOGY/PRINCIPAL

findingsA total of 88 S. erinaceieuropaei isolates were collected from naturally infected frogs in 14 geographical locations of China. The complete cytb and cox1 genes of each sample was amplified and sequenced. Total 61 haplotypes were found in these 88 concatenated sequences. Each sampled population and the total population have high haplotype diversity (Hd), accompanied by very low nucleotide diversity (Pi). Phylogenetic analyses of haplotypes revealed two distinct clades (HeN+HuN+GZ-AS clade and GX+HN+GZ-GY clade) corresponding two sub-networks yielded by the median-joining network. Pairwise FST values supported great genetic differentiation between S. erinaceieuropaei populations. Both negative Fu's FS value of neutrality tests and unimodal curve of mismatch distribution analyses supported demographic population expansion in the HeN+HuN+GZ-AS clade. The BEAST analysis showed that the divergence time between the two clades took place in the early Pleistocene (1.16 Myr), and by Bayesian skyline plot (BSP) an expansion occurred after about 0.3 Myr ago.

conclusionsS. erinaceieuropaei from central and southern China has significant phylogeographic structure, and climatic oscillations during glacial periods in the Quaternary may affect the demography and diversification of this species.

Indexed as

AnimalsChinaDNA, MitochondrialGenetic VariationGeographyPhylogenyPhylogeographySpirometraDNA, Mitochondrial

Identifiers

PMID25793277
PMCPMC4368571

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.