Evidence map›Paper›PMID 25792744›Full record

ArticleThe Journal of biological chemistry2015

Cytosolic accumulation of small nucleolar RNAs (snoRNAs) is dynamically regulated by NADPH oxidase.

Christopher L Holley, Melissa W Li, Benjamin S Scruggs, Scot J Matkovich, Daniel S Ory, Jean E Schaffer

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. snoCLASH Reveals Extensive snoRNA-mRNA Interaction Networks.bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Circulation research · 2025
    Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. 2'-RNA (New York, N.Y.) · 2024
    Review
  15. Article
  16. Intron Editing RevealsInternational journal of molecular sciences · 2023
    Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Christopher L HolleyFrom the Diabetic Cardiovascular Disease Center and.
Melissa W LiFrom the Diabetic Cardiovascular Disease Center and.
Benjamin S ScruggsFrom the Diabetic Cardiovascular Disease Center and.
Scot J MatkovichCenter for Pharmacogenomics, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missiouri 63110.
Daniel S OryFrom the Diabetic Cardiovascular Disease Center and.
Jean E SchafferFrom the Diabetic Cardiovascular Disease Center and jschaff@wustl.edu.
Washington University in St. Louis · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI TIMOTHY J. EBERLEIN · 2001 to 2026
$128.0M
Washington University Institute of Clinical and Translational SciencesUL1TR000448 · NCATS · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2012 to 2016
$41.4M
Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
PRINCIPLES IN CARDIVASCULAR RESEARCH TRAINING PROGRAMT32HL007081 · NHLBI · WASHINGTON UNIVERSITY · PI Abhinav Diwan, Karen Ellen Joynt Maddox · 1985 to 2026
$10.6M
CELLULAR MECHANISMS THAT PROMOTE OR PREVENT LIPOTOXICITYR01DK064989 · NIDDK · WASHINGTON UNIVERSITY · PI SCHAFFER, JEAN E. · 2003 to 2021
$5.8M
SNORNAS ARE ESSENTIAL MEDIATORS OF ROS SIGNALING IN CARDIOVASCULAR CELLSK08HL114889 · NHLBI · WASHINGTON UNIVERSITY · PI HOLLEY, CHRISTOPHER LEE · 2012 to 2016
$614k
NCATS NIH HHS UL1 TR000448NCI NIH HHS P30 CA091842NHLBI NIH HHS K08 HL114889NHLBI NIH HHS T32 HL007081NHLBI NIH HHS T32 HL07081NIDDK NIH HHS P30 DK052574NIDDK NIH HHS R01 DK064989
6 · The paper itself

Abstract

Small nucleolar RNAs (snoRNAs) guide nucleotide modifications of cellular RNAs in the nucleus. We previously showed that box C/D snoRNAs from the Rpl13a locus are unexpected mediators of physiologic oxidative stress, independent of their predicted ribosomal RNA modifications. Here we demonstrate that oxidative stress induced by doxorubicin causes rapid cytoplasmic accumulation of the Rpl13a snoRNAs through a mechanism that requires superoxide and a nuclear splice variant of NADPH oxidase. RNA-sequencing analysis reveals that box C/D snoRNAs as a class are present in the cytoplasm, where their levels are dynamically regulated by NADPH oxidase. These findings suggest that snoRNAs may orchestrate the response to environmental stress through molecular interactions outside of the nucleus.

Indexed as

AnimalsBiocatalysisBiological TransportCytosolDoxorubicinNADPH OxidasesOxidative StressRatsRibosomal ProteinsRNA, Small NucleolarSuperoxidesDoxorubicinNADPH OxidasesRibosomal ProteinsRNA, Small NucleolarRpl13a protein, ratSuperoxidesDoxorubicinIntracellular TraffickingMolecular Cell BiologyNADPH OxidaseReactive Oxygen Species (ROS)Small Nucleolar RNA (snoRNA)Subcellular Fractionation

Identifiers

PMID25792744
PMCPMC4416874
OpenAlexW2039926685

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.