Evidence map›Paper›PMID 25792053›Full record

ArticleGenome announcements2015

Draft Genome Sequence of Thauera sp. Strain SWB20, Isolated from a Singapore Wastewater Treatment Facility Using Gel Microdroplets.

Armand E K Dichosa, Karen W Davenport, Po-E Li, Sanaa A Ahmed, Hajnalka Daligault, Cheryl D Gleasner, Yuliya Kunde, Kim McMurry, Chien-Chi Lo, Krista G Reitenga and 9 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Panel 3: Genomics, precision medicine and targeted therapies.International journal of pediatric otorhinolaryngology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Armand E K DichosaBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA armand@lanl.gov scs@bx.psu.edu.
Karen W DavenportBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Po-E LiBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Sanaa A AhmedBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Hajnalka DaligaultBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Cheryl D GleasnerBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Yuliya KundeBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Kim McMurryBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Chien-Chi LoBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Krista G ReitengaBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Ashlynn R DaughtonBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Xiaohong ShenBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Seth FrietzeBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Dongping WangBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Shannon L JohnsonBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.ORCID http://orcid.org/0000-0002-3972-9208
Daniela I Drautz-MosesSingapore Centre on Environmental Life Sciences Engineering, Nanyang Technological University, Singapore.
Stephan SchusterSingapore Centre on Environmental Life Sciences Engineering, Nanyang Technological University, Singapore.
Patrick S ChainBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Cliff HanBioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report here the genome sequence of Thauera sp. strain SWB20, isolated from a Singaporean wastewater treatment facility using gel microdroplets (GMDs) and single-cell genomics (SCG). This approach provided a single clonal microcolony that was sufficient to obtain a 4.9-Mbp genome assembly of an ecologically relevant Thauera species.

Identifiers

PMID25792053
PMCPMC4395064

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.