Evidence map›Paper›PMID 25790278›Full record

ArticleJournal of medicinal chemistry2015

Ensemble-based virtual screening for cannabinoid-like potentiators of the human glycine receptor α1 for the treatment of pain.

Marta M Wells, Tommy S Tillman, David D Mowrey, Tianmo Sun, Yan Xu, Pei Tang

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Cys-loop receptors on cannabinoids: All high?Frontiers in physiology · 2022
    Pooled it
  2. Review
  3. Article
  4. Novel Scaffold Agonists of the αMolecules (Basel, Switzerland) · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Membrane cholesterol dependence of cannabinoid modulation of glycine receptor.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
  11. Modulation of Glycine Receptor-Mediated Pain SignalingFrontiers in molecular neuroscience · 2019
    Article
  12. Article
  13. Glycine receptors and glycine transporters: targets for novel analgesics?Cellular and molecular life sciences : CMLS · 2018
    Review
  14. Article
  15. Computational methods in drug discovery.Beilstein journal of organic chemistry · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Marta M Wells *Department of Anesthesiology, University of Pittsburgh, Pittsburgh, PA 15261.
Tommy S Tillman *Department of Anesthesiology, University of Pittsburgh, Pittsburgh, PA 15261.
David D MowreyDepartment of Anesthesiology, University of Pittsburgh, Pittsburgh, PA 15261.
Tianmo SunDepartment of Anesthesiology, University of Pittsburgh, Pittsburgh, PA 15261.
Yan XuDepartment of Anesthesiology, University of Pittsburgh, Pittsburgh, PA 15261.
Pei TangDepartment of Anesthesiology, University of Pittsburgh, Pittsburgh, PA 15261.
University of Pittsburgh · US

Funding

NMR STUDIES OF MECHANISMS OF GENERAL ANESTHESIAR37GM049202 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI XU, YAN · 2004 to 2013
$4.9M
ANESTHETIC SITES IN TRANSMEMBRANE PEPTIDES BY NMRR01GM056257 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TANG, PEI · 1998 to 2017
$4.8M
Integrated Interdisciplinary, inter-university PhD Program Computational Biology (T32)T32EB009403 · NIBIB · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BAHAR, IVET, BAR-JOSEPH, ZIV · 2009 to 2023
$4.4M
ANESTHETIC EFFECTS ON ION CHANNEL STRUCTURES & DYNAMICSR01GM066358 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TANG, PEI · 2002 to 2014
$3.6M
NMR STUDIES OF MECHANISMS OF GENERAL ANESTHESIAR01GM049202 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI XU, YAN · 2000 to 2018
$3.3M
NIBIB NIH HHS T32 EB009403NIBIB NIH HHS T32EB009403NIGMS NIH HHS R01 GM049202NIGMS NIH HHS R01 GM056257NIGMS NIH HHS R01GM056257NIGMS NIH HHS R01 GM066358NIGMS NIH HHS R01GM066358NIGMS NIH HHS R37 GM049202NIGMS NIH HHS R37GM049202
6 · The paper itself

Abstract

The human glycine receptors (hGlyRs) are chloride-selective ion channels that mediate inhibitory neurotransmission in the brain stem and spinal cord. They are also targets for compounds of potential use in analgesic therapies. Here, we develop a strategy to discover analgesic drugs via structure-based virtual screening based on the recently published NMR structure of the hGlyR-α1 transmembrane domain (PDB ID: 2M6I ) and the critical role of residue S296 in hGlyR-α1 potentiation by Δ(9)-tetrahydrocannabinol (THC). We screened 1549 FDA-approved drugs in the DrugBank database on an ensemble of 180 hGlyR-α1 structures generated from molecular dynamics simulations of the NMR structure of the hGlyR-α1 transmembrane domain in different lipid environments. Thirteen hit compounds from the screening were selected for functional validation in Xenopus laevis oocytes expressing hGlyR-α1. Only one compound showed no potentiation effects; seven potentiated hGlyR-α1 at a level greater than THC at 1 μM. Our virtual screening protocol is generally applicable to drug targets with lipid-facing binding sites.

Indexed as

Analgesics, Non-NarcoticAnimalsBinding SitesCannabinoidsDrug Evaluation, PreclinicalFemaleLipidsMolecular Dynamics SimulationMolecular Targeted TherapyNuclear Magnetic Resonance, BiomolecularOocytesPainProtein ConformationProtein Structure, TertiaryReceptors, GlycineReproducibility of ResultsAnalgesics, Non-NarcoticCannabinoidsLipidsReceptors, Glycine

Identifiers

PMID25790278
PMCPMC4414066
OpenAlexW1997119184

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.