Evidence map›Paper›PMID 25788683›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2015

Anatomical identification of extracellularly recorded cells in large-scale multielectrode recordings.

Peter H Li, Jeffrey L Gauthier, Max Schiff, Alexander Sher, Daniel Ahn, Greg D Field, Martin Greschner, Edward M Callaway, Alan M Litke, E J Chichilnisky

Abstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Direct-Print 3D Electrodes for Large-Scale, High-Density, and Customizable Neural Interfaces.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. High-Fidelity Reproduction of Visual Signals by Electrical Stimulation in the Central Primate Retina.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Global Motion Processing by Populations of Direction-Selective Retinal Ganglion Cells.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Peter H LiDepartments of Neurosurgery and Ophthalmology, and Hansen Experimental Physics Laboratory, Stanford University, Stanford, California 94305, Systems Neurobiology, The Salk Institute for Biological Studies, La Jolla, California 92037, Google Inc, Mountain View, California 94043.ORCID http://orcid.org/0000-0001-6193-4454
Jeffrey L GauthierSystems Neurobiology, The Salk Institute for Biological Studies, La Jolla, California 92037.
Max SchiffSystems Neurobiology, The Salk Institute for Biological Studies, La Jolla, California 92037.
Alexander SherSanta Cruz Institute for Particle Physics, University of California, Santa Cruz, California 95064.
Daniel AhnSystems Neurobiology, The Salk Institute for Biological Studies, La Jolla, California 92037.
Greg D FieldSystems Neurobiology, The Salk Institute for Biological Studies, La Jolla, California 92037, Department of Neurobiology, Duke University School of Medicine, Durham, North Carolina 27710, and.
Martin GreschnerSystems Neurobiology, The Salk Institute for Biological Studies, La Jolla, California 92037, Department of Neuroscience, Carl von Ossietzky University, Oldenburg 26129, Germany.
Edward M CallawaySystems Neurobiology, The Salk Institute for Biological Studies, La Jolla, California 92037.ORCID http://orcid.org/0000-0002-6366-5267
Alan M LitkeSanta Cruz Institute for Particle Physics, University of California, Santa Cruz, California 95064.
E J ChichilniskyDepartments of Neurosurgery and Ophthalmology, and Hansen Experimental Physics Laboratory, Stanford University, Stanford, California 94305, Systems Neurobiology, The Salk Institute for Biological Studies, La Jolla, California 92037, ej@stanford.edu.

Funding

Organization and Function of Visual Cortical Feedback SystemsR01EY022577 · NEI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI EDWARD M CALLAWAY · 2012 to 2026
$8.0M
Receptive Field Mosaics of Midget, Parasol and Small Bi-Stratified Ganglion CellsR01EY017992 · NEI · STANFORD UNIVERSITY · PI CHICHILNISKY, EDUARDO · 2007 to 2014
$3.2M
Large-Scale Recording and Imaging in the Primate RetinaF31NS054519 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GAUTHIER, JEFFREY L · 2006 to 2007
$54k
NEI NIH HHS EY017992NEI NIH HHS EY022577NEI NIH HHS R01 EY017992NEI NIH HHS R01 EY022577NINDS NIH HHS F31 NS054519NINDS NIH HHS F31NS054519
6 · The paper itself

Abstract

This study combines for the first time two major approaches to understanding the function and structure of neural circuits: large-scale multielectrode recordings, and confocal imaging of labeled neurons. To achieve this end, we develop a novel approach to the central problem of anatomically identifying recorded cells, based on the electrical image: the spatiotemporal pattern of voltage deflections induced by spikes on a large-scale, high-density multielectrode array. Recordings were performed from identified ganglion cell types in the macaque retina. Anatomical images of cells in the same preparation were obtained using virally transfected fluorescent labeling or by immunolabeling after fixation. The electrical image was then used to locate recorded cell somas, axon initial segments, and axon trajectories, and these signatures were used to identify recorded cells. Comparison of anatomical and physiological measurements permitted visualization and physiological characterization of numerically dominant ganglion cell types with high efficiency in a single preparation.

Indexed as

Action PotentialsAnimalsExtracellular FluidFemaleMacaca fascicularisMacaca mulattaMacaca radiataMaleMicroelectrodesPhotic StimulationRandom AllocationRetinaRetinal Ganglion Cellsganglion cellsimmunohistochemistrymorphologymultielectrode arrayretinaviral transfection

Identifiers

PMID25788683
PMCPMC4363392

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.