Evidence map›Paper›PMID 25788137›Full record

ArticleClinical and translational science2015

Quantitative Proteomic Analysis of Peripheral Blood Mononuclear Cells in Ankylosing Spondylitis by iTRAQ.

Anji Cai, Suwen Qi, Zhuowa Su, Huaqing Shen, Yu Yang, Liang He, Yong Dai

Open access · bronzeAbstract read
In one paragraph

Article in Clinical and translational science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Biomarker development for axial spondyloarthritis.Nature reviews. Rheumatology · 2020
    Review
  5. Molecular Biology Approaches to Understanding Spondyloarthritis.Rheumatic diseases clinics of North America · 2020
    Review
  6. Article
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Anji CaiDepartment of Laboratory, Nanshan Affiliated Hospital of Guangdong Medical College, Shenzhen, Guangdong, P.R. China.
Suwen QiDepartment of Biomedical Engineering, Medical School, Shenzhen University, Shenzhen, Guangdong, P.R. China.
Zhuowa SuDepartment of Laboratory, Nanshan Affiliated Hospital of Guangdong Medical College, Shenzhen, Guangdong, P.R. China.
Huaqing ShenDepartment of Laboratory, Nanshan Affiliated Hospital of Guangdong Medical College, Shenzhen, Guangdong, P.R. China.
Yu YangDepartment of Laboratory, Nanshan Affiliated Hospital of Guangdong Medical College, Shenzhen, Guangdong, P.R. China.
Liang HeDepartment of Laboratory, Nanshan Affiliated Hospital of Guangdong Medical College, Shenzhen, Guangdong, P.R. China.
Yong DaiThe Second Clinical Medical College, Jinan University, Shenzhen People's Hospital, No 1017, Shenzhen, Guangdong, P.R. China.
Guangdong Medical College · CNJinan University · CNShenzhen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study was designed to identify and quantify the different proteins expression levels in ankylosing spondylitis (AS) and to explore the pathogenesis of AS. We performed isobaric tags for relative and absolute quantitation (iTRAQ) coupled with multiple chromatographic fractionation and tandem mass spectrometry to detect the proteins profiling in peripheral blood mononuclear cells (PBMCs) from AS patients and healthy controls. Mascot software and the International Protein Index and the Gene Ontology (GO) database were used to conduct the bioinformatics analysis. The differentially expressed proteins were validated by enzyme-linked immunosorbent assay (ELISA). A total of 1,232 proteins were identified by iTRAQ, of which 183 showed differential expression and 18 differentially expressed proteins were acute phase reactants. Upon mapping of the differentially expressed proteins to GO database, we found four differentially expressed proteins involved in the biological process of cell killing, including up-regulated cathepsin G (CTSG), neutrophil defensin3 (DEFA3), protein tyrosine phosphatase receptor type C (PTPRC), and down-regulated peroxiredoxin-1(PRDX1),which were consistent with the verified results of ELISA. Our proteomic analyses suggested that the proteins involved in the biological process of cell killing might play an important role in the pathogenesis of AS.

Indexed as

Adultalpha-DefensinsBiomarkersBlood ProteinsCase-Control StudiesCathepsin GChromatography, High Pressure LiquidComputational BiologyDatabases, ProteinEnzyme-Linked Immunosorbent AssayFemaleHumansLeukocyte Common AntigensLeukocytes, MononuclearMaleMiddle Agedalpha-DefensinsBiomarkersBlood ProteinsCathepsin GCTSG protein, humanhuman neutrophil peptide 3Leukocyte Common AntigensPeroxiredoxinsPRDX1 protein, humanPTPRC protein, humanankylosing spondylitiscell killingiTRAQproteomic

Identifiers

PMID25788137
PMCPMC5351074
OpenAlexW1501795946

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.