Evidence map›Paper›PMID 25787707›Full record

ArticleDevelopmental neurobiology2015

Dynamic gene expression in the song system of zebra finches during the song learning period.

Christopher R Olson, Lisa K Hodges, Claudio V Mello

Abstract read
In one paragraph

Article in Developmental neurobiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Genetic Differences in Purple Finch (Ecology and evolution · 2026
    Article
  3. Article
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Christopher R OlsonDepartment of Behavioral Neuroscience, Oregon Health & Science University, 3181 SW Sam Jackson Park Road L470, Portland, Oregon, 97239-3098.
Lisa K HodgesBiology Department, Lewis and Clark College, 0615 S.W. Palatine Hill Road, Portland, Oregon 97219.
Claudio V MelloDepartment of Behavioral Neuroscience, Oregon Health & Science University, 3181 SW Sam Jackson Park Road L470, Portland, Oregon, 97239-3098.

Funding

A Gene Expression Brain Atlas of the Zebra Finch.R24GM092842 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI MELLO, CLAUDIO V · 2010 to 2013
$1.5M
Retinoid Signaling in Songbirds: Learned Song, Gene Expression and NeurogenesisF32NS062609 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI OLSON, CHRISTOPHER R · 2009 to 2011
$144k
Howard Hughes Medical InstituteNIGMS NIH HHS R24 GM092842NIGMS NIH HHS R24-GM092842NINDS NIH HHS F32 NS062609NINDS NIH HHS F32-NS062609
6 · The paper itself

Abstract

The brain circuitry that controls song learning and production undergoes marked changes in morphology and connectivity during the song learning period in juvenile zebra finches, in parallel to the acquisition, practice and refinement of song. Yet, the genetic programs and timing of regulatory change that establish the neuronal connectivity and plasticity during this critical learning period remain largely undetermined. To address this question, we used in situ hybridization to compare the expression patterns of a set of 30 known robust molecular markers of HVC and/or area X, major telencephalic song nuclei, between adult and juvenile male zebra finches at different ages during development (20, 35, 50 days post-hatch, dph). We found that several of the genes examined undergo substantial changes in expression within HVC or its surrounds, and/or in other song nuclei. They fit into broad patterns of regulation, including those whose expression within HVC during this period increases (COL12A1, COL 21A1, MPZL1, PVALB, and CXCR7) or decreases (e.g., KCNT2, SAP30L), as well as some that show decreased expression in the surrounding tissue with little change within song nuclei (e.g. SV2B, TAC1). These results reveal a broad range of molecular changes that occur in the song system in concert with the song learning period. Some of the genes and pathways identified are potential modulators of the developmental changes associated with the emergence of the adult properties of the song control system, and/or the acquisition of learned vocalizations in songbirds.

Indexed as

AnimalsAvian ProteinsBrainCell CountCritical Period, PsychologicalFinchesGene Expression Regulation, DevelopmentalIn Situ HybridizationLearningMaleVocalization, AnimalAvian Proteinsbrain developmentgene expressionsong systemvocal learningzebra finch

Identifiers

PMID25787707
PMCPMC4575259

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.