Evidence map›Paper›PMID 25787250›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Neomorphic effects of recurrent somatic mutations in Yin Yang 1 in insulin-producing adenomas.

M Kyle Cromer, Murim Choi, Carol Nelson-Williams, Annabelle L Fonseca, John W Kunstman, Reju M Korah, John D Overton, Shrikant Mane, Barton Kenney, Carl D Malchoff and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Molecular Basis of Pancreatic Neuroendocrine Tumors.International journal of molecular sciences · 2024
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  16. Calcium Permeable Channels in Cancer Hallmarks.Frontiers in pharmacology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 2 countries.

M Kyle CromerDepartments of Genetics, Howard Hughes Medical Institute.ORCID http://orcid.org/0000-0002-3711-8833
Murim ChoiDepartments of Genetics, Howard Hughes Medical Institute.
Carol Nelson-WilliamsDepartments of Genetics, Howard Hughes Medical Institute.
Annabelle L FonsecaSurgery, Yale Endocrine Neoplasia Laboratory, Yale Cancer Center, and.
John W KunstmanSurgery, Yale Endocrine Neoplasia Laboratory, Yale Cancer Center, and.
Reju M KorahSurgery, Yale Endocrine Neoplasia Laboratory, Yale Cancer Center, and.
John D OvertonDepartments of Genetics, Yale Center for Genome Analysis, Yale University School of Medicine, New Haven, CT 06510;
Shrikant ManeDepartments of Genetics, Yale Center for Genome Analysis, Yale University School of Medicine, New Haven, CT 06510;
Barton KenneyPathology, and.
Carl D MalchoffDivision of Endocrinology and Neag Cancer Center, University of Connecticut Health Center, Farmington, CT 06030; and.
Peter StalbergDepartment of Surgical Sciences, Uppsala University, Uppsala, Sweden 751 05.
Göran AkerströmDepartment of Surgical Sciences, Uppsala University, Uppsala, Sweden 751 05.
Gunnar WestinDepartment of Surgical Sciences, Uppsala University, Uppsala, Sweden 751 05.
Per HellmanDepartment of Surgical Sciences, Uppsala University, Uppsala, Sweden 751 05.
Tobias CarlingSurgery, Yale Endocrine Neoplasia Laboratory, Yale Cancer Center, and.
Peyman BjörklundDepartment of Surgical Sciences, Uppsala University, Uppsala, Sweden 751 05.
Richard P LiftonDepartments of Genetics, Howard Hughes Medical Institute, Yale Center for Genome Analysis, Yale University School of Medicine, New Haven, CT 06510; Internal Medicine, richard.lifton@yale.edu.
Uppsala University · SEHoward Hughes Medical Institute · USYale Cancer Center · USYale University · USApath (United States) · USUConn Health · US

Funding

Yale Pathology Tissue Services Shared ResourceP30CA016359 · NCI · YALE UNIVERSITY · PI DAVID L RIMM · 1985 to 2026
$85.0M
Yale University Clinical and Translational Science Award ProgramUL1TR000142 · NCATS · YALE UNIVERSITY · PI SHERWIN, ROBERT S · 2012 to 2015
$31.8M
Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
Howard Hughes Medical InstituteNCATS NIH HHS UL1 TR000142NIGMS NIH HHS T32 GM007223
6 · The paper itself

Abstract

Insulinomas are pancreatic islet tumors that inappropriately secrete insulin, producing hypoglycemia. Exome and targeted sequencing revealed that 14 of 43 insulinomas harbored the identical somatic mutation in the DNA-binding zinc finger of the transcription factor Yin Yang 1 (YY1). Chromatin immunoprecipitation sequencing (ChIP-Seq) showed that this T372R substitution changes the DNA motif bound by YY1. Global analysis of gene expression demonstrated distinct clustering of tumors with and without YY1(T372R) mutations. Genes showing large increases in expression in YY1(T372R) tumors included ADCY1 (an adenylyl cyclase) and CACNA2D2 (a Ca(2+) channel); both are expressed at very low levels in normal β-cells and show mutation-specific YY1 binding sites. Both gene products are involved in key pathways regulating insulin secretion. Expression of these genes in rat INS-1 cells demonstrated markedly increased insulin secretion. These findings indicate that YY1(T372R) mutations are neomorphic, resulting in constitutive activation of cAMP and Ca(2+) signaling pathways involved in insulin secretion.

Indexed as

Gene Expression RegulationMutation, MissenseAdenylyl CyclasesAdolescentAdultAgedAged, 80 and overBase SequenceBinding SitesBlood GlucoseCalciumCalcium ChannelsCohort StudiesCyclic AMPFemaleHumansadenylyl cyclase 1Adenylyl CyclasesBlood GlucoseCACNA2D2 protein, humanCalciumCalcium ChannelsCyclic AMPInsulinYY1 protein, humanYY1 Transcription Factoradenylyl cyclasecAMPexome sequencinginsulinomaYY1

Identifiers

PMID25787250
PMCPMC4386328
OpenAlexW2061136790

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.