Evidence map›Paper›PMID 25786212›Full record

ArticlePloS one2015

Strategies for individual phenotyping of linoleic and arachidonic acid metabolism using an oral glucose tolerance test.

Edoardo Saccenti, John van Duynhoven, Doris M Jacobs, Age K Smilde, Huub C J Hoefsloot

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Edoardo SaccentiLaboratory of Systems and Synthetic Biology, University of Wageningen and Research Center, Wageningen, The Netherlands; Biosystem Data Analysis Group, University of Amsterdam, Amsterdam, The Netherlands; Netherlands Metabolomics Centre, Leiden, The Netherlands.
John van DuynhovenUnilever Research & Development, Vlaardingen, The Netherlands; Laboratory of Biophysics, University of Wageningen and Research Center, Wageningen, The Netherlands; Netherlands Metabolomics Centre, Leiden, The Netherlands.
Doris M JacobsUnilever Research & Development, Vlaardingen, The Netherlands; Netherlands Metabolomics Centre, Leiden, The Netherlands.
Age K SmildeBiosystem Data Analysis Group, University of Amsterdam, Amsterdam, The Netherlands; Netherlands Metabolomics Centre, Leiden, The Netherlands.
Huub C J HoefslootBiosystem Data Analysis Group, University of Amsterdam, Amsterdam, The Netherlands; Netherlands Metabolomics Centre, Leiden, The Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability to restore homeostasis upon environmental challenges has been proposed as a measure for health. Metabolic profiling of plasma samples during the challenge response phase should offer a profound view on the flexibility of a phenotype to cope with daily stressors. Current data modeling approaches, however, struggle to extract biological descriptors from time-resolved metabolite profiles that are able to discriminate between different phenotypes. Thus, for the case of oxylipin responses in plasma upon an oral glucose tolerance test we developed a modeling approach that incorporates a priori biological pathway knowledge. The degradation pathways of arachidonic and linoleic acids were modeled using a regression model based on a pseudo-steady-state approximated model, resulting in a parameter A that summarizes the relative enzymatic activity in these pathways. Analysis of the phenotypic parameters As suggests that different phenotypes can be discriminated according to preferred relative activity of the arachidonic and linoleic pathway. Correlation analysis shows that there is little or no competition between the arachidonic and linoleic acid pathways, although they share the same enzymes.

Indexed as

Models, BiologicalPhenotypeArachidonic AcidGlucose Tolerance TestHumansLinoleic AcidMetabolic Networks and PathwaysOxylipinsRegression AnalysisArachidonic AcidLinoleic AcidOxylipins

Identifiers

PMID25786212
PMCPMC4364740

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.