Evidence map›Paper›PMID 25786081›Full record

ArticleDNA and cell biology2015

Differential expression of miR-499 and validation of predicted target genes in the testicular tissue of swine at different developmental stages.

Xiaojun Zhang, Chuanmin Li, Xin Liu, Chunyan Lu, Chunyan Bai, Zhihui Zhao, Boxing Sun

Open access · greenAbstract read
In one paragraph

Article in DNA and cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Xiaojun ZhangCollege of Animal Science, Jilin University , Changchun, People's Republic of China .
Chuanmin LiCollege of Animal Science, Jilin University , Changchun, People's Republic of China .
Xin LiuCollege of Animal Science, Jilin University , Changchun, People's Republic of China .
Chunyan LuCollege of Animal Science, Jilin University , Changchun, People's Republic of China .
Chunyan BaiCollege of Animal Science, Jilin University , Changchun, People's Republic of China .
Zhihui ZhaoCollege of Animal Science, Jilin University , Changchun, People's Republic of China .
Boxing SunCollege of Animal Science, Jilin University , Changchun, People's Republic of China .
Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

microRNAs (miRNAs) represent a newly identified class of nonprotein-coding ∼ 22 nt small RNA that plays important roles in multiple biological processes by degrading targeted mRNA or repressing mRNA translation. This study observed the morphology of swine testicular tissue at different developmental stages (including 1-day old, 1-7 month old) by Hematoxylin-eosin staining. We also examined the expression of miR-499 and its target genes (CYLC1, DMRT1, QKI, XRN2, ZNF313) in samples of tissue slices using quantitative reverse-transcription polymerase chain reaction, which showed that miR-499 had a significant negative correlation with QKI gene. Then, the proteins of QKI gene expression were determined by western blot, which were consistent with results of quantitative polymerase chain reaction (qPCR) detection. Therefore, the luciferase reporter gene system was used to verify correlation between miR-499 and QKI gene. Activity of luciferase was significantly lower in miR-499 co-transfected with pmiR-RB-REPORT-QKI-WT group than the miR-499 co-transfected with pmiR-RB-REPORT-QKI-mut/si groups, indicating that target sequence of miR-499 existed in 3'UTR of QKI gene. Furthermore, the expressions of miR-499 and QKI were detected in testicular cells that were transfected with miR-499, miR-499 negative control and untreated. The results showed that the diameter of convoluted seminiferous tubule growth increased with age. Significantly different expressions of miR-499 and its target genes were found in swine testicular tissue at different developmental stages (p<0.05), overexpressing miR-499 analysis, suggesting that miR-499 was negatively correlated to the expression of QKI (p<0.05). In conclusion, QKI is a target gene of miR-499.

Indexed as

AnimalsBase SequenceBinding SitesGene ExpressionGene Expression Regulation, DevelopmentalMaleMicroRNAsOrgan SpecificityRNA-Binding ProteinsRNA InterferenceSus scrofaTestisMicroRNAsRNA-Binding Proteins

Identifiers

PMID25786081
PMCPMC4504256
OpenAlexW2322795106

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.