Evidence map›Paper›PMID 25785515›Full record

ArticleViruses2015

From lesions to viral clones: biological and molecular diversity amongst autochthonous Brazilian vaccinia virus.

Graziele Oliveira, Felipe Assis, Gabriel Almeida, Jonas Albarnaz, Maurício Lima, Ana Cláudia Andrade, Rafael Calixto, Cairo Oliveira, José Diomedes Neto, Giliane Trindade and 3 more

Abstract read
In one paragraph

Article in Viruses, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Virological and Immunological Outcomes of Coinfections.Clinical microbiology reviews · 2018
    Review
  6. Review
  7. Article
  8. Ocular Vaccinia Infection in Dairy Worker, Brazil.Emerging infectious diseases · 2018
    Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Graziele OliveiraLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. graziufmg@yahoo.com.br.
Felipe AssisLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. felipelopeasssis@gmail.com.
Gabriel AlmeidaAQUACEN) Laboratório Nacional Oficial de Referência de Doenças de Animais Aquáticos, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. gabriel.magno@gmail.com.
Jonas AlbarnazLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. jonasalbarnaz@yahoo.com.br.
Maurício LimaLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. maurili15@hotmail.com.
Ana Cláudia AndradeLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. ana.andrade2008@hotmail.com.
Rafael CalixtoLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. calixtomicro@yahoo.com.br.
Cairo OliveiraLaboratório de Retroviroses, Departamento de Medicina Veterinária Preventiva, Escola de Veterinária da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. cairo_henrique@yahoo.com.br.
José Diomedes NetoCentro Agropecuário, Departamento de Ciência Animal, Universidade Federal do Pará, Pará 66075-110, Brazil. diomedes@ufpa.br.
Giliane TrindadeLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. gitrindade@yahoo.com.br.
Paulo César FerreiraLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. peregrinopcp@hotmail.com.
Erna Geessien KroonLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. ernagkroon@gmail.com.
Jônatas AbrahãoLaboratório de Vírus, Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 31270-901, Brazil. jonatas.abrahao@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vaccinia virus (VACV) has had an important role for humanity because of its use during the smallpox eradication campaign. VACV is the etiologic agent of the bovine vaccinia (BV), an emerging zoonosis that has been associated with economic, social, veterinary and public health problems, mainly in Brazil and India. Despite the current and historical VACV importance, there is little information about its circulation, prevalence, origins and maintenance in the environment, natural reservoirs and diversity. Brazilian VACV (VACV-BR) are grouped into at least two groups based on genetic and biological diversity: group 1 (G1) and group 2 (G2). In this study, we went to the field and investigated VACV clonal diversity directly from exanthemous lesions, during BV outbreaks. Our results demonstrate that the G1 VACV-BR were more frequently isolated. Furthermore, we were able to co-detect the two variants (G1 and G2) in the same sample. Molecular and biological analysis corroborated previous reports and confirmed the co-circulation of two VACV-BR lineages. The detected G2 clones presented exclusive genetic and biological markers, distinct to reference isolates, including VACV-Western Reserve. Two clones presented a mosaic profile, with both G1 and G2 features based on the molecular analysis of A56R, A26L and C23L genes. Indeed, some SNPs and INDELs in A56R nucleotide sequences were observed among clones of the same virus population, maybe as a result of an increased mutation rate in a mixed population. These results provide information about the diversity profile in VACV populations, highlighting its importance to VACV evolution and maintenance in the environment.

Indexed as

Genetic VariationAnimalsBody WeightBrazilCattleCowpoxDisease Models, AnimalGenotypeMaleMice, Inbred BALB CMolecular EpidemiologyMolecular Sequence DataSequence Analysis, DNASequence HomologyVaccinia virusVirulence

Identifiers

PMID25785515
PMCPMC4379567

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.