Evidence map›Paper›PMID 25782998›Full record

ArticleOrganic letters2015

Nematode signaling molecules derived from multimodular assembly of primary metabolic building blocks.

Joshua J Yim, Neelanjan Bose, Jan M Meyer, Ralf J Sommer, Frank C Schroeder

Open access · greenAbstract read
In one paragraph

Article in Organic letters, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Decoding chemical communication in nematodes.Natural product reports · 2017
    Review
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Joshua J Yim†Boyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.
Neelanjan Bose†Boyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.
Jan M Meyer‡Department for Evolutionary Biology, Max Planck Institute for Developmental Biology, Tubingen 72076, Germany.
Ralf J Sommer‡Department for Evolutionary Biology, Max Planck Institute for Developmental Biology, Tubingen 72076, Germany.
Frank C Schroeder†Boyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.
Max Planck Institute for Developmental Biology · DECornell University · US

Funding

Antimicrobial discovery from metabolomics of nematode pathogen interactionsR01AT008764 · NCCIH · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KIM, DENNIS H, SCHROEDER, FRANK CLEMENS · 2014 to 2018
$3.2M
Small Molecule Signaling in Caenorhabditis elegansR01GM088290 · NIGMS · BOYCE THOMPSON INST FOR PLANT RESEARCH · PI SCHROEDER, FRANK CLEMENS · 2010 to 2017
$2.2M
NCCIH NIH HHS AT008764NCCIH NIH HHS R01 AT008764NIGMS NIH HHS GM088290NIGMS NIH HHS R01 GM088290
6 · The paper itself

Abstract

In the nematode model organisms Caenorhabditis elegans and Pristionchus pacificus, a new class of natural products based on modular assembly of primary-metabolism-derived building blocks control organismal development and behavior. We report identification and biological activities of the first pentamodular metabolite, pasa#9, and the 8-oxoadenine-containing npar#3 from P. pacificus. These structures suggest co-option of nucleoside and tryptophan metabolic pathways for the biosynthesis of endogenous metabolite libraries that transcend the dichotomy between "primary" and "secondary" metabolism.

Indexed as

AdenineAnimalsBiological EvolutionCaenorhabditis elegansMolecular StructureNematodaNucleosidesSignal TransductionTryptophan8-hydroxyadenineAdenineNucleosidesTryptophan

Identifiers

PMID25782998
PMCPMC4878434
OpenAlexW2076525366

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.