Evidence map›Paper›PMID 25780578›Full record

ArticleBasic and clinical andrology2014

RHOXF2 gene, a new candidate gene for spermatogenesis failure.

Christophe Frainais, Caroline Kannengiesser, Martine Albert, Denise Molina-Gomes, Florence Boitrelle, Marc Bailly, Bernard Grandchamp, Jacqueline Selva, François Vialard

Open access · goldAbstract read
In one paragraph

Article in Basic and clinical andrology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. TheProceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Christophe FrainaisLaboratoire Clement, Le Blanc Mesnil, F-93110 France.
Caroline KannengiesserDepartment of Genetics, Hôpital Bichat, Paris, F-75018 France.
Martine AlbertEA 2493, University of Versailles Saint-Quentin, Versailles, F-78035 France ; Department of Reproductive Biology, Cytogenetics, Gynecology and Obstetrics, Poissy Saint Germain Hospital, Poissy, F-78303 France.
Denise Molina-GomesDepartment of Reproductive Biology, Cytogenetics, Gynecology and Obstetrics, Poissy Saint Germain Hospital, Poissy, F-78303 France.
Florence BoitrelleEA 2493, University of Versailles Saint-Quentin, Versailles, F-78035 France ; Department of Reproductive Biology, Cytogenetics, Gynecology and Obstetrics, Poissy Saint Germain Hospital, Poissy, F-78303 France.
Marc BaillyDepartment of Reproductive Biology, Cytogenetics, Gynecology and Obstetrics, Poissy Saint Germain Hospital, Poissy, F-78303 France.
Bernard GrandchampDepartment of Genetics, Hôpital Bichat, Paris, F-75018 France.
Jacqueline SelvaEA 2493, University of Versailles Saint-Quentin, Versailles, F-78035 France ; Department of Reproductive Biology, Cytogenetics, Gynecology and Obstetrics, Poissy Saint Germain Hospital, Poissy, F-78303 France.
François VialardEA 2493, University of Versailles Saint-Quentin, Versailles, F-78035 France ; Department of Reproductive Biology, Cytogenetics, Gynecology and Obstetrics, Poissy Saint Germain Hospital, Poissy, F-78303 France.
Centre Hospitalier Intercommunal de Poissy · FRHôpital Bichat-Claude-Bernard · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionGenes involved in testicular differentiation, spermatogenesis, proliferation and apoptosis of germ cells have been shown to evolve rapidly and display rapid DNA changes. These genes are therefore good candidates for explaining impairments in spermatogenesis. Initial studies of some of these genes appear to confirm this hypothesis. The RHOXF2 candidate gene belongs to the RHOX family clustered in Xq24 and is specifically expressed in the testis. It contains four exons and codes for a 288 amino acid (aa) transcription factor. It has a high degree of homology (>99.9%) with its paralogue RHOXF2B, which is also preferentially expressed in the testis.

objectivesTo sequence RHOXF2 and RHOXF2B in intracytoplasmic sperm injection (ICSI) patients and identify any single-nucleotide polymorphisms (SNPs) associated with impaired spermatogenesis. MATERIALS: A cohort of 327 patients in ICSI programmes at Poissy and Bichat hospitals. All patients gave their written, informed consent to participation. One hundred patients had unaffected spermatogenesis and 227 displayed impaired spermatogenesis.

methodsThe four exons in each of RHOXF2 and RHOXF2B were sequenced in 47 patients with oligospermia or non-obstructive azoospermia. Given that exons 2 and 3 were found to harbour most of the SNPs, only these two exons were sequenced in the remaining 280 subjects.

resultsDue to the extremely high degree of sequence identity between RHOXF2 and RHOXF2B, we were not able to distinguish between the sequences of these two genes. Although 9 SNPs were identified, there were no significant frequency differences between ICSI patients with normal vs. impaired spermatogenesis. Two insertions were identified: a 21-nucleotide insertion was retrieved in both groups and a guanine insertion (inducing a premature stop codon) only found in two patients with impaired spermatogenesis. CONCLUSION/OUTLOOK: RHOXF2 is a good candidate for rapid evolution by positive selection. Analysis of the polymorphism frequency in exons 2 and 3 did not allow us to correlate the identified SNPs with male infertility. However, a single nucleotide insertion was identified only in men with impaired spermatogenesis. Further work will be needed to establish whether genetic changes in RHOXF2 can give rise to defects in spermatogenesis.

Indexed as

Gene clusterHomoedomainInfertilityPositive selection pressureRHOXF2

Identifiers

PMID25780578
PMCPMC4349744
OpenAlexW2071672538

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.