Evidence map›Paper›PMID 25779044›Full record

ArticleNucleic acids research2015

DAP5 associates with eIF2β and eIF4AI to promote Internal Ribosome Entry Site driven translation.

Noa Liberman, Valentina Gandin, Yuri V Svitkin, Maya David, Geneviève Virgili, Maritza Jaramillo, Martin Holcik, Bhushan Nagar, Adi Kimchi, Nahum Sonenberg

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 96 citations in OpenAlex.

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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Noa LibermanDepartment of Molecular Genetics, The Weizmann Institute of Science, Rehovot 7610001, Israel nliberman@genetics.med.harvard.edu.
Valentina GandinDepartment of Biochemistry, McGill University, Montréal, Québec H3A 1A3, Canada Rosalind and Morris Goodman Cancer Centre, Montréal, Québec H3A 1A3, Canada valentina.gandin@mail.mcgill.ca.
Yuri V SvitkinDepartment of Biochemistry, McGill University, Montréal, Québec H3A 1A3, Canada Rosalind and Morris Goodman Cancer Centre, Montréal, Québec H3A 1A3, Canada.
Maya DavidDepartment of Molecular Genetics, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Geneviève VirgiliDepartment of Biochemistry, McGill University, Montréal, Québec H3A 1A3, Canada Groupe de Recherche Axé sur la Structure des Protéines, Montréal, Québec H3A 1A3, Canada.
Maritza JaramilloDepartment of Biochemistry, McGill University, Montréal, Québec H3A 1A3, Canada Rosalind and Morris Goodman Cancer Centre, Montréal, Québec H3A 1A3, Canada.
Martin HolcikApoptosis Research Centre, Children's Hospital of Eastern Ontario Research Institute, Ottawa, Ontario K1N 6N5, Canada.
Bhushan NagarDepartment of Biochemistry, McGill University, Montréal, Québec H3A 1A3, Canada Groupe de Recherche Axé sur la Structure des Protéines, Montréal, Québec H3A 1A3, Canada.
Adi KimchiDepartment of Molecular Genetics, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Nahum SonenbergDepartment of Biochemistry, McGill University, Montréal, Québec H3A 1A3, Canada Rosalind and Morris Goodman Cancer Centre, Montréal, Québec H3A 1A3, Canada nahum.sonenberg@mcgill.ca.
McGill University · CAWeizmann Institute of Science · ILChildren's Hospital of Eastern Ontario · CA

Funding

Canadian Institutes of Health Research MOP-7214
6 · The paper itself

Abstract

Initiation is a highly regulated rate-limiting step of mRNA translation. During cap-dependent translation, the cap-binding protein eIF4E recruits the mRNA to the ribosome. Specific elements in the 5'UTR of some mRNAs referred to as Internal Ribosome Entry Sites (IRESes) allow direct association of the mRNA with the ribosome without the requirement for eIF4E. Cap-independent initiation permits translation of a subset of cellular and viral mRNAs under conditions wherein cap-dependent translation is inhibited, such as stress, mitosis and viral infection. DAP5 is an eIF4G homolog that has been proposed to regulate both cap-dependent and cap-independent translation. Herein, we demonstrate that DAP5 associates with eIF2β and eIF4AI to stimulate IRES-dependent translation of cellular mRNAs. In contrast, DAP5 is dispensable for cap-dependent translation. These findings provide the first mechanistic insights into the function of DAP5 as a selective regulator of cap-independent translation.

Indexed as

Protein BiosynthesisEukaryotic Initiation Factor-2BEukaryotic Initiation Factor-4GHEK293 CellsHumansPeptide Initiation FactorsRibosomesRNA CapseIF-4EIF4G2 protein, humanEukaryotic Initiation Factor-2BEukaryotic Initiation Factor-4GPeptide Initiation FactorsRNA Caps

Identifiers

PMID25779044
PMCPMC4402527
OpenAlexW2165629846

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.