Evidence map›Paper›PMID 25778907›Full record

ArticleGenes, brain, and behavior2015

The DYX2 locus and neurochemical signaling genes contribute to speech sound disorder and related neurocognitive domains.

J D Eicher, C M Stein, F Deng, A A Ciesla, N R Powers, R Boada, S D Smith, B F Pennington, S K Iyengar, B A Lewis and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Genes, brain, and behavior, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

J D EicherDepartment of Genetics, Yale University School of Medicine, New Haven, CT.
C M Stein
F Deng
A A Ciesla
N R Powers
R Boada
S D Smith
B F Pennington
S K Iyengar
B A Lewis
J R Gruen
Case Western Reserve University · USYale University · USUniversity of Colorado Denver · USUniversity of Denver · USUniversity of Nebraska Medical Center · US

Funding

VALIDITY OF SUBTYPES OF ADHDP50HD027802 · NICHD · UNIVERSITY OF COLORADO AT BOULDER · PI ERIK G WILLCUTT · 1990 to 2026
$44.9M
Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
FAMILIAL STUDY OF SEVERE PHONOLOGY DISORDERSR01DC000528 · NIDCD · CASE WESTERN RESERVE UNIVERSITY · PI LEWIS, BARBARA A · 1995 to 2018
$9.5M
Discovery of the 6p21.3 Reading Disability GeneR01NS043530 · NINDS · YALE UNIVERSITY · PI GRUEN, JEFFREY R · 2003 to 2010
$4.3M
Genetic causes of developmental speech sound disorder in familiesR01DC012380 · NIDCD · CASE WESTERN RESERVE UNIVERSITY · PI IYENGAR, SUDHA K · 2012 to 2016
$3.2M
Etiology of Reading Disabilities and Comorbid ADHDR01HD047264 · NICHD · UNIVERSITY OF COLORADO AT BOULDER · PI WILLCUTT, ERIK G · 2005 to 2009
$2.7M
The Linguistic Phenotype in Familial DyslexiaR01HD049027 · NICHD · UNIVERSITY OF DENVER (COLORADO SEMINARY) · PI PENNINGTON, BRUCE F · 2005 to 2009
$2.4M
Molecular Genetics of AutismR01NS043550 · NINDS · UNIVERSITY OF IOWA · PI WASSINK, THOMAS H. · 2002 to 2006
$1.7M
Pleiotropic Roles of Dyslexia Genes in Neurodevelopmental Language ImpairmentsF31DC012270 · NIDCD · YALE UNIVERSITY · PI EICHER, JOHN · 2011 to 2013
$121k
FAMILIAL STUDY OF SEVERE PHONOLOGY DISORDERSR29DC000528 · NIDCD · CASE WESTERN RESERVE UNIVERSITY · PI LEWIS, BARBARA A · 1989 to 1993
–
NICHD NIH HHS P50 HD027802NICHD NIH HHS R01 HD047264NICHD NIH HHS R01 HD049027NIDCD NIH HHS DC000528NIDCD NIH HHS DC012380NIDCD NIH HHS F31 DC012270NIDCD NIH HHS R01 DC000528NIDCD NIH HHS R01 DC012380NIGMS NIH HHS T32 GM007223NINDS NIH HHS R01 NS043530NINDS NIH HHS R01 NS043550
6 · The paper itself

Abstract

A major milestone of child development is the acquisition and use of speech and language. Communication disorders, including speech sound disorder (SSD), can impair a child's academic, social and behavioral development. Speech sound disorder is a complex, polygenic trait with a substantial genetic component. However, specific genes that contribute to SSD remain largely unknown. To identify associated genes, we assessed the association of the DYX2 dyslexia risk locus and markers in neurochemical signaling genes (e.g., nicotinic and dopaminergic) with SSD and related endophenotypes. We first performed separate primary associations in two independent samples - Cleveland SSD (210 affected and 257 unaffected individuals in 127 families) and Denver SSD (113 affected individuals and 106 unaffected individuals in 85 families) - and then combined results by meta-analysis. DYX2 markers, specifically those in the 3' untranslated region of DCDC2 (P = 1.43 × 10(-4) ), showed the strongest associations with phonological awareness. We also observed suggestive associations of dopaminergic-related genes ANKK1 (P = 1.02 × 10(-2) ) and DRD2 (P = 9.22 × 10(-3) ) and nicotinic-related genes CHRNA3 (P = 2.51 × 10(-3) ) and BDNF (P = 8.14 × 10(-3) ) with case-control status and articulation. Our results further implicate variation in putative regulatory regions in the DYX2 locus, particularly in DCDC2, influencing language and cognitive traits. The results also support previous studies implicating variation in dopaminergic and nicotinic neural signaling influencing human communication and cognitive development. Our findings expand the literature showing genetic factors (e.g., DYX2) contributing to multiple related, yet distinct neurocognitive domains (e.g., dyslexia, language impairment, and SSD). How these factors interactively yield different neurocognitive and language-related outcomes remains to be elucidated.

Indexed as

Genetic LociBrain-Derived Neurotrophic FactorDyslexiaHumansMicrotubule-Associated ProteinsPolymorphism, Single NucleotideProtein Serine-Threonine KinasesReceptors, Dopamine D2Receptors, NicotinicRegulatory Sequences, Nucleic AcidSpeech Sound DisorderANKK1 protein, humanBrain-Derived Neurotrophic FactorDCDC2 protein, humanDRD2 protein, humanMicrotubule-Associated ProteinsProtein Serine-Threonine KinasesReceptors, Dopamine D2Receptors, NicotinicDCDC2dopaminergicDYX2nicotinicspeech sound disorder

Identifiers

PMID25778907
PMCPMC4492462
OpenAlexW2070047554

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.