ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2015
High-density genetic map construction and identification of a locus controlling weeping trait in an ornamental woody plant (Prunus mume Sieb. et Zucc).
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers.
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90 citing papers in PubMed.
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- Construction of a High-DensityInternational journal of molecular sciences · 2023Article
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- A major QTL identification and candidate gene analysis of watermelon fruit cracking using QTL-seq and RNA-seq.Frontiers in plant science · 2023Article
- Construction of a high-resolution genetic map and identification of single nucleotide polymorphism markers relevant to flower stalk height in onion.Frontiers in plant science · 2023Article
- Construction of a high-density genetic map and mapping of a spike length locus for rye.PloS one · 2023Article
- Natural allelic variation confers high resistance to sweet potato weevils in sweet potato.Nature plants · 2022Article
- Integrated Transcriptome and Metabolome Analysis of Color Change and Low-Temperature Response during Flowering ofInternational journal of molecular sciences · 2022Article
- Pedigree reconstruction and genetic analysis of major ornamental characters of ornamental crabapple (Malus spp.) based on paternity analysis.Scientific reports · 2022Article
- Candidate powdery mildew resistance gene in wheat landrace cultivar Hongyoumai discovered using SLAF and BSR-seq.BMC plant biology · 2022Article
- QTL mapping for growth-related traits by constructing the first genetic linkage map in Simao pine.BMC plant biology · 2022Article
- Construction of a genome-wide genetic linkage map and identification of quantitative trait loci for powdery mildew resistance inFrontiers in plant science · 2022Article
- Construction of High-Density Genetic Map and Identification of a Bruchid Resistance Locus in Mung Bean (Frontiers in genetics · 2022Article
- Identification of Stable and Multiple Environment Interaction QTLs and Candidate Genes for Fiber Productive Traits Under Irrigated and Water Stress Conditions Using Intraspecific RILs ofFrontiers in plant science · 2022Article
- Germplasm Resources and Strategy for Genetic Breeding ofFrontiers in plant science · 2022Review
- Mapping Floral Genetic Architecture inFrontiers in plant science · 2022Article
- Construction of a high-density genetic linkage map and QTL analysis of morphological traits in an F1Physiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
30 more citing papers are in PubMed but not listed here.
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8 authors.
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Abstract
High-density genetic map is a valuable tool for fine mapping locus controlling a specific trait especially for perennial woody plants. In this study, we firstly constructed a high-density genetic map of mei (Prunus mume) using SLAF markers, developed by specific locus amplified fragment sequencing (SLAF-seq). The linkage map contains 8,007 markers, with a mean marker distance of 0.195 cM, making it the densest genetic map for the genus Prunus. Though weeping trees are used worldwide as landscape plants, little is known about weeping controlling gene(s) (Pl). To test the utility of the high-density genetic map, we did fine-scale mapping of this important ornamental trait. In total, three statistic methods were performed progressively based on the result of inheritance analysis. Quantitative trait loci (QTL) analysis initially revealed that a locus on linkage group 7 was strongly responsible for weeping trait. Mutmap-like strategy and extreme linkage analysis were then applied to fine map this locus within 1.14 cM. Bioinformatics analysis of the locus identified some candidate genes. The successful localization of weeping trait strongly indicates that the high-density map constructed using SLAF markers is a worthy reference for mapping important traits for woody plants.
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