Evidence map›Paper›PMID 25776224›Full record

ArticleMedical and veterinary entomology2015

A standard photomap of ovarian nurse cell chromosomes in the European malaria vector Anopheles atroparvus.

G N Artemov, M V Sharakhova, A N Naumenko, D A Karagodin, E M Baricheva, V N Stegniy, I V Sharakhov

Open access · greenAbstract read
In one paragraph

Article in Medical and veterinary entomology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

G N ArtemovLaboratory of Evolutionary Cytogenetics, Tomsk State University, Tomsk, Russia.
M V SharakhovaLaboratory of Evolutionary Cytogenetics, Tomsk State University, Tomsk, Russia.
A N NaumenkoDepartment of Entomology, Fralin Life Science Institute, Virginia Tech, Blacksburg, VA, U.S.A.
D A KaragodinLaboratory of Cell Differentiation Mechanisms, Institute of Cytology and Genetics, Novosibirsk, Russia.
E M BarichevaLaboratory of Cell Differentiation Mechanisms, Institute of Cytology and Genetics, Novosibirsk, Russia.
V N StegniyLaboratory of Evolutionary Cytogenetics, Tomsk State University, Tomsk, Russia.
I V SharakhovDepartment of Entomology, Fralin Life Science Institute, Virginia Tech, Blacksburg, VA, U.S.A.
Virginia Tech · USInstitute of Cytology and Genetics · RUNational Research Tomsk State University · RU

Funding

Comparative genome mapping of the Anopheles species clusterR21AI099528 · NIAID · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI SHARAKHOV, IGOR V · 2014 to 2015
$419k
NIAID NIH HHS 1R21AI099528-01A1NIAID NIH HHS R21 AI099528
6 · The paper itself

Abstract

Anopheles atroparvus (Diptera: Culicidae) is one of the main malaria vectors of the Maculipennis group in Europe. Cytogenetic analysis based on salivary gland chromosomes has been used in taxonomic and population genetic studies of mosquitoes from this group. However, a high-resolution cytogenetic map that could be used in physical genome mapping in An. atroparvus is still lacking. In the present study, a high-quality photomap of the polytene chromosomes from ovarian nurse cells of An. atroparvus was developed. Using fluorescent in situ hybridization, 10 genes from the five largest genomic supercontigs on the polytene chromosome were localized and 28% of the genome was anchored to the cytogenetic map. The study established chromosome arm homology between An. atroparvus and the major African malaria vector Anopheles gambiae, suggesting a whole-arm translocation between autosomes of these two species. The standard photomap constructed for ovarian nurse cell chromosomes of An. atroparvus will be useful for routine physical mapping. This map will assist in the development of a fine-scale chromosome-based genome assembly for this species and will also facilitate comparative and evolutionary genomics studies in the genus Anopheles.

Indexed as

Genome, InsectAnimalsAnophelesChromosome MappingFemaleInsect VectorsMalariaPolytene ChromosomesCytogenetic mapgenome assemblymalaria mosquito

Identifiers

PMID25776224
PMCPMC4515173
OpenAlexW1506109861

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.