Evidence map›Paper›PMID 25775587›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Two transcription factors, Pou4f2 and Isl1, are sufficient to specify the retinal ganglion cell fate.

Fuguo Wu, Tadeusz J Kaczynski, Santhosh Sethuramanujam, Renzhong Li, Varsha Jain, Malcolm Slaughter, Xiuqian Mu

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 115 citations in OpenAlex.

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  16. InducibleCells · 2023
    Article
  17. Article
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  19. Neurog2 regulates Isl1 to modulate horizontal cell number.Development (Cambridge, England) · 2023
    Article
  20. Review

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Fuguo WuDepartment of Ophthalmology/Ross Eye Institute, Developmental Genomics Group, New York State Center of Excellence in Bioinformatics and Life Sciences, State University of New York Eye Institute.
Tadeusz J KaczynskiDepartment of Ophthalmology/Ross Eye Institute, Developmental Genomics Group, New York State Center of Excellence in Bioinformatics and Life Sciences, State University of New York Eye Institute, Neuroscience Graduate Program, and.
Santhosh SethuramanujamNeuroscience Graduate Program, and Department of Physiology and Biophysics, University at Buffalo, Buffalo, NY 14203; and.
Renzhong LiDepartment of Ophthalmology/Ross Eye Institute, Developmental Genomics Group, New York State Center of Excellence in Bioinformatics and Life Sciences, State University of New York Eye Institute.
Varsha JainNeuroscience Graduate Program, and Department of Physiology and Biophysics, University at Buffalo, Buffalo, NY 14203; and.
Malcolm SlaughterState University of New York Eye Institute, Neuroscience Graduate Program, and Department of Physiology and Biophysics, University at Buffalo, Buffalo, NY 14203; and.
Xiuqian MuDepartment of Ophthalmology/Ross Eye Institute, Developmental Genomics Group, New York State Center of Excellence in Bioinformatics and Life Sciences, State University of New York Eye Institute, Neuroscience Graduate Program, and Cancer Center Support Grant Cancer Genetics Program, Roswell Park Cancer Institute, Buffalo, NY 14263 xmu@buffalo.edu.
State University of New York · USUniversity at Buffalo, State University of New York · USRoswell Park Comprehensive Cancer Center · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
Regulatory mechanisms for retinal ganglion cell genesisR01EY020545 · NEI · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI Xiuqian Mu · 2011 to 2026
$5.7M
SYNAPTIC MECHANISMS IN THE VERTEBRATE RETINAR01EY005725 · NEI · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI SLAUGHTER, MALCOLM M · 1985 to 2012
$4.4M
NCI NIH HHS P30 CA016056NEI NIH HHS EY020545NEI NIH HHS EY05725NEI NIH HHS R01 EY005725NEI NIH HHS R01 EY020545
6 · The paper itself

Abstract

As with other retinal cell types, retinal ganglion cells (RGCs) arise from multipotent retinal progenitor cells (RPCs), and their formation is regulated by a hierarchical gene-regulatory network (GRN). Within this GRN, three transcription factors--atonal homolog 7 (Atoh7), POU domain, class 4, transcription factor 2 (Pou4f2), and insulin gene enhancer protein 1 (Isl1)--occupy key node positions at two different stages of RGC development. Atoh7 is upstream and is required for RPCs to gain competence for an RGC fate, whereas Pou4f2 and Isl1 are downstream and regulate RGC differentiation. However, the genetic and molecular basis for the specification of the RGC fate, a key step in RGC development, remains unclear. Here we report that ectopic expression of Pou4f2 and Isl1 in the Atoh7-null retina using a binary knockin-transgenic system is sufficient for the specification of the RGC fate. The RGCs thus formed are largely normal in gene expression, survive to postnatal stages, and are physiologically functional. Our results indicate that Pou4f2 and Isl1 compose a minimally sufficient regulatory core for the RGC fate. We further conclude that during development a core group of limited transcription factors, including Pou4f2 and Isl1, function downstream of Atoh7 to determine the RGC fate and initiate RGC differentiation.

Indexed as

Cell LineageGene Expression Regulation, DevelopmentalAllelesAnimalsBasic Helix-Loop-Helix ProteinsCell CycleCell DifferentiationCentral Nervous SystemElectrophysiologyFemaleHomeodomain ProteinsIn Situ HybridizationLIM-Homeodomain ProteinsMaleMiceMice, Inbred C57BLAtoh7 protein, mouseBasic Helix-Loop-Helix ProteinsHomeodomain Proteinsinsulin gene enhancer binding protein Isl-1LIM-Homeodomain ProteinsNerve Tissue ProteinsPou4f2 protein, mouseTranscription Factor Brn-3BTranscription Factorscell fate specificationgene regulationneural developmentretinal developmenttranscription factors

Identifiers

PMID25775587
PMCPMC4386335
OpenAlexW1990433739

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.