Evidence map›Paper›PMID 25775519›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Environmental stress induces trinucleotide repeat mutagenesis in human cells.

Nimrat Chatterjee, Yunfu Lin, Beatriz A Santillan, Patricia Yotnda, John H Wilson

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. The Role of NRF2 in Trinucleotide Repeat Expansion Disorders.Antioxidants (Basel, Switzerland) · 2024
    Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Nickel Carcinogenesis Mechanism: DNA Damage.International journal of molecular sciences · 2019
    Review
  14. Article
  15. Article
  16. Review
  17. Mechanisms of genetic instability caused by (CGG)Nature structural & molecular biology · 2018
    Article
  18. Review
  19. Of Men and Mice: Modeling the Fragile X Syndrome.Frontiers in molecular neuroscience · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Nimrat ChatterjeeVerna and Marrs McLean Department of Biochemistry and Molecular Biology and.
Yunfu LinVerna and Marrs McLean Department of Biochemistry and Molecular Biology and.
Beatriz A SantillanDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030;
Patricia YotndaCenter for Cell and Gene Therapy, Baylor College of Medicine, Texas Children's Hospital, and Houston Methodist Hospital, Houston, TX 77030.
John H WilsonVerna and Marrs McLean Department of Biochemistry and Molecular Biology and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030; jwilson@bcm.edu.
Baylor College of Medicine · USMethodist Hospital · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Virology CoreP30AI036211 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BUTEL, JANET S · 1994 to 2015
$21.7M
PROGRAM IN HUMAN MOLECULAR GENETICST32GM008307 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SHAULSKY, GAD · 1990 to 2020
$6.6M
RHODOSPIN GENE CORRECTION BY OLIGONUCLEOTIDE TARGETINGR01EY011731 · NEI · BAYLOR COLLEGE OF MEDICINE · PI WILSON, JOHN H · 1997 to 2014
$5.9M
TARGETED RECOMBINATION IN MAMMALIAN CELLSR01GM038219 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI WILSON, JOHN H · 1987 to 2013
$4.3M
BD Biosciences Special Order LSRIIS10RR024574 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI LUMPKIN, ELLEN A · 2009 to 2009
$430k
NCI NIH HHS P30 CA125123NCRR NIH HHS S10 RR024574NEI NIH HHS R01 EY011731NIAID NIH HHS P30 AI036211NIGMS NIH HHS R01 GM038219NIGMS NIH HHS T32 GM008307
6 · The paper itself

Abstract

The dynamic mutability of microsatellite repeats is implicated in the modification of gene function and disease phenotype. Studies of the enhanced instability of long trinucleotide repeats (TNRs)-the cause of multiple human diseases-have revealed a remarkable complexity of mutagenic mechanisms. Here, we show that cold, heat, hypoxic, and oxidative stresses induce mutagenesis of a long CAG repeat tract in human cells. We show that stress-response factors mediate the stress-induced mutagenesis (SIM) of CAG repeats. We show further that SIM of CAG repeats does not involve mismatch repair, nucleotide excision repair, or transcription, processes that are known to promote TNR mutagenesis in other pathways of instability. Instead, we find that these stresses stimulate DNA rereplication, increasing the proportion of cells with >4 C-value (C) DNA content. Knockdown of the replication origin-licensing factor CDT1 eliminates both stress-induced rereplication and CAG repeat mutagenesis. In addition, direct induction of rereplication in the absence of stress also increases the proportion of cells with >4C DNA content and promotes repeat mutagenesis. Thus, environmental stress triggers a unique pathway for TNR mutagenesis that likely is mediated by DNA rereplication. This pathway may impact normal cells as they encounter stresses in their environment or during development or abnormal cells as they evolve metastatic potential.

Indexed as

MutagenesisStress, PhysiologicalTrinucleotide RepeatsCold TemperatureDNADNA RepairDNA ReplicationGene Regulatory NetworksGenomic InstabilityGreen Fluorescent ProteinsHEK293 CellsHot TemperatureHumansMicrosatellite RepeatsOxidative StressPhenotypeDNAGreen Fluorescent ProteinsDNA rereplicationhuman cellsmicrosatellite repeatsstress-induced mutagenesistrinucleotide repeats

Identifiers

PMID25775519
PMCPMC4378418
OpenAlexW1977608961

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.