Evidence map›Paper›PMID 25775513›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Plant-derived antifungal agent poacic acid targets β-1,3-glucan.

Jeff S Piotrowski, Hiroki Okada, Fachuang Lu, Sheena C Li, Li Hinchman, Ashish Ranjan, Damon L Smith, Alan J Higbee, Arne Ulbrich, Joshua J Coon and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
17.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 105 citations in OpenAlex.

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  14. Review
  15. Hinokitiol inhibitsFrontiers in microbiology · 2023
    Article
  16. Caspofungin resistance in Candida albicans: genetic factors and synergistic compounds for combination therapies.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Review
  17. Article
  18. Article
  19. Prospects for anti-Cell surface (Amsterdam, Netherlands) · 2021
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 3 countries.

Jeff S PiotrowskiGreat Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI 53703; jpiotrowski@wisc.edu ohya@k.u-tokyo.ac.jp.
Hiroki OkadaDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa, Chiba, Japan 277-8561;
Fachuang LuGreat Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI 53703;
Sheena C LiRIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan 351-0198;
Li HinchmanGreat Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI 53703;
Ashish RanjanDepartments of Plant Pathology and.
Damon L SmithDepartments of Plant Pathology and.
Alan J HigbeeChemistry, University of Wisconsin-Madison, Madison, WI 53706;
Arne UlbrichChemistry, University of Wisconsin-Madison, Madison, WI 53706;
Joshua J CoonChemistry, University of Wisconsin-Madison, Madison, WI 53706;
Raamesh DeshpandeDepartment of Computer Science and Engineering, University of Minnesota-Twin Cities, Minneapolis, MN 55455; and.
Yury V BukhmanGreat Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI 53703;
Sean McIlwainGreat Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI 53703;
Irene M OngGreat Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI 53703;
Chad L MyersDepartment of Computer Science and Engineering, University of Minnesota-Twin Cities, Minneapolis, MN 55455; and.
Charles BooneRIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan 351-0198; Terrence Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada M5S 3E1.
Robert LandickGreat Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI 53703;
John RalphGreat Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI 53703;
Mehdi KabbageDepartments of Plant Pathology and.
Yoshikazu OhyaDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa, Chiba, Japan 277-8561; jpiotrowski@wisc.edu ohya@k.u-tokyo.ac.jp.
University of Wisconsin–Madison · USGreat Lakes Bioenergy Research Center · USThe University of Tokyo · JPUniversity of Minnesota · USRIKEN Center for Sustainable Resource Science · JPUniversity of Toronto · CA

Funding

Mapping the reference genetic network of a eukaryotic cellR01HG005853 · NHGRI · UNIVERSITY OF TORONTO · PI ANDREWS, BRENDA JEAN, BOONE, CHARLES · 2010 to 2025
$7.6M
Methods for large-scale analysis of chemical-genetic interactionsR01HG005084 · NHGRI · UNIVERSITY OF MINNESOTA · PI MYERS, CHAD L · 2010 to 2022
$2.9M
Sparse Structural Equation Models for Gene Networks and Chemical GenomicsR01GM104975 · NIGMS · UNIVERSITY OF MIAMI CORAL GABLES · PI CAI, XIAODONG · 2012 to 2016
$1.8M
NHGRI NIH HHS 1R01HG005084-01A1NHGRI NIH HHS R01 HG005084NHGRI NIH HHS R01 HG005853NHGRI NIH HHS R01HG005853NIGMS NIH HHS 1R01GM104975-01NIGMS NIH HHS R01 GM104975
6 · The paper itself

Abstract

A rise in resistance to current antifungals necessitates strategies to identify alternative sources of effective fungicides. We report the discovery of poacic acid, a potent antifungal compound found in lignocellulosic hydrolysates of grasses. Chemical genomics using Saccharomyces cerevisiae showed that loss of cell wall synthesis and maintenance genes conferred increased sensitivity to poacic acid. Morphological analysis revealed that cells treated with poacic acid behaved similarly to cells treated with other cell wall-targeting drugs and mutants with deletions in genes involved in processes related to cell wall biogenesis. Poacic acid causes rapid cell lysis and is synergistic with caspofungin and fluconazole. The cellular target was identified; poacic acid localized to the cell wall and inhibited β-1,3-glucan synthesis in vivo and in vitro, apparently by directly binding β-1,3-glucan. Through its activity on the glucan layer, poacic acid inhibits growth of the fungi Sclerotinia sclerotiorum and Alternaria solani as well as the oomycete Phytophthora sojae. A single application of poacic acid to leaves infected with the broad-range fungal pathogen S. sclerotiorum substantially reduced lesion development. The discovery of poacic acid as a natural antifungal agent targeting β-1,3-glucan highlights the potential side use of products generated in the processing of renewable biomass toward biofuels as a source of valuable bioactive compounds and further clarifies the nature and mechanism of fermentation inhibitors found in lignocellulosic hydrolysates.

Indexed as

beta-GlucansCaspofunginCell MembraneCell WallCoumaric AcidsDose-Response Relationship, DrugDrug SynergismEchinocandinsFungicides, IndustrialGenomicsHydrolysisInhibitory Concentration 50LigninLipopeptidesPlant ExtractsPoaceaebeta-1,3-glucanbeta-GlucansCaspofunginCoumaric AcidsEchinocandinsFungicides, IndustrialLigninlignocelluloseLipopeptidesPlant Extractspoacic acidStilbeneschemical genomicsfungal cell wallhigh-dimensional morphometricslignocellulosic hydrolysatesSaccharomyces cerevisiae

Identifiers

PMID25775513
PMCPMC4378397
OpenAlexW2019332620

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.