Evidence map›Paper›PMID 25775228›Full record

ArticleThe journal of physical chemistry. B2015

Tau assembly: the dominant role of PHF6 (VQIVYK) in microtubule binding region repeat R3.

Pritam Ganguly, Thanh D Do, Luca Larini, Nichole E LaPointe, Alexander J Sercel, Madeleine F Shade, Stuart C Feinstein, Michael T Bowers, Joan-Emma Shea

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 183 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. amyloid-predict and LLPS-predict: Predicting phase separation propensities in the intrinsically disordered proteome.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
  7. Article
  8. Tau4RD fibril polymorphism is imprinted during early aggregation.bioRxiv : the preprint server for biology · 2025
    Article
  9. Review
  10. Disrupting Amyloid Filaments of Tau by Means of Electric Fields.The journal of physical chemistry. B · 2025
    Article
  11. Analyses of exon 4a structure reveal unique properties of Big tau.bioRxiv : the preprint server for biology · 2025
    Article
  12. Article
  13. Article
  14. Review
  15. Structure-specific Mini-Prion Model for Alzheimer's Disease Tau Fibrils.bioRxiv : the preprint server for biology · 2025
    Article
  16. Review
  17. Water-directed pinning is key to tau prion formation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  18. Inducers and modulators of protein aggregation in Alzheimer's disease - Critical tools for understanding the foundations of aggregate structures.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2025
    Review
  19. Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Pritam Ganguly†Department of Chemistry and Biochemistry, ‡Neuroscience Research Institute and Department of Molecular, Cellular and Developmental Biology, and ∥Department of Physics, University of California at Santa Barbara, Santa Barbara, California 93106, United States.
Thanh D Do†Department of Chemistry and Biochemistry, ‡Neuroscience Research Institute and Department of Molecular, Cellular and Developmental Biology, and ∥Department of Physics, University of California at Santa Barbara, Santa Barbara, California 93106, United States.
Luca Larini†Department of Chemistry and Biochemistry, ‡Neuroscience Research Institute and Department of Molecular, Cellular and Developmental Biology, and ∥Department of Physics, University of California at Santa Barbara, Santa Barbara, California 93106, United States.
Nichole E LaPointe†Department of Chemistry and Biochemistry, ‡Neuroscience Research Institute and Department of Molecular, Cellular and Developmental Biology, and ∥Department of Physics, University of California at Santa Barbara, Santa Barbara, California 93106, United States.
Alexander J Sercel†Department of Chemistry and Biochemistry, ‡Neuroscience Research Institute and Department of Molecular, Cellular and Developmental Biology, and ∥Department of Physics, University of California at Santa Barbara, Santa Barbara, California 93106, United States.
Madeleine F Shade†Department of Chemistry and Biochemistry, ‡Neuroscience Research Institute and Department of Molecular, Cellular and Developmental Biology, and ∥Department of Physics, University of California at Santa Barbara, Santa Barbara, California 93106, United States.
Stuart C Feinstein†Department of Chemistry and Biochemistry, ‡Neuroscience Research Institute and Department of Molecular, Cellular and Developmental Biology, and ∥Department of Physics, University of California at Santa Barbara, Santa Barbara, California 93106, United States.
Michael T Bowers†Department of Chemistry and Biochemistry, ‡Neuroscience Research Institute and Department of Molecular, Cellular and Developmental Biology, and ∥Department of Physics, University of California at Santa Barbara, Santa Barbara, California 93106, United States.
Joan-Emma Shea†Department of Chemistry and Biochemistry, ‡Neuroscience Research Institute and Department of Molecular, Cellular and Developmental Biology, and ∥Department of Physics, University of California at Santa Barbara, Santa Barbara, California 93106, United States.
University of California, Santa Barbara · US

Funding

Amyloid Beta-Protein: Wild Type and Familial Mutant Assembly and InhibitionR01AG047116 · NIA · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI BOWERS, MICHAEL THOMAS · 2013 to 2016
$1.8M
NIA NIH HHS 1R01AG047116-01NIA NIH HHS R01 AG047116
6 · The paper itself

Abstract

Self-aggregation of the microtubule-binding protein Tau reduces its functionality and is tightly associated with Tau-related diseases, termed tauopathies. Tau aggregation is also strongly associated with two nucleating six-residue segments, namely PHF6 (VQIVYK) and PHF6* (VQIINK). In this paper, using experiments and computational modeling, we study the self-assembly of individual and binary mixtures of Tau fragments containing PHF6* (R2/wt; (273)GKVQIINKKLDL(284)) and PHF6 (R3/wt; (306)VQIVYKPVDLSK(317)) and a mutant R2/ΔK280 associated with a neurodegenerative tauopathy. The initial stage of aggregation is probed by ion-mobility mass spectrometry, the kinetics of aggregation monitored with Thioflavin T assays, and the morphology of aggregates visualized by transmission electron microscopy. Insights into the structure of early aggregates and the factors stabilizing the aggregates are obtained from replica exchange molecular dynamics simulations. Our data suggest that R3/wt has a much stronger aggregation propensity than either R2/wt or R2/ΔK280. Heterodimers containing R3/wt are less stable than R3/wt homodimers but much more stable than homodimers of R2/wt and R2/ΔK280, suggesting a possible role of PHF6*-PHF6 interactions in initiating the aggregation of full-length Tau. Lastly, R2/ΔK280 binds more strongly to R3/wt than R2/wt, suggesting a possible mechanism for a pathological loss of normal Tau function.

Indexed as

BenzothiazolesDimerizationHumansMass SpectrometryMicroscopy, Electron, TransmissionMolecular Dynamics SimulationMutationProtein Bindingtau ProteinsThiazolesBenzothiazolestau ProteinsThiazolesthioflavin T

Identifiers

PMID25775228
PMCPMC4428543
OpenAlexW1966442040

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.