Evidence map›Paper›PMID 25774914›Full record

ArticlePloS one2015

Yy1 gene dosage effect and bi-allelic expression of Peg3.

Bambarendage P U Perera, Ryoichi Teruyama, Joomyeong Kim

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Deficiency of the paternally-expressed imprintedFrontiers in neuroscience · 2024
    Article
  3. Molecular codes and in vitro generation of hypocretin and melanin concentrating hormone neurons.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Bambarendage P U PereraDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, United States of America.
Ryoichi TeruyamaDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, United States of America.
Joomyeong KimDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, United States of America.
Louisiana State University · US

Funding

Imprinting studies of a paternally expressed Usp29 geneR01GM066225 · NIGMS · UNIVERSITY OF CALIF-LAWRNC LVRMR NAT LAB · PI KIM, JOOMYEONG · 2004 to 2013
$2.6M
Aebp2 as an epigenetic regulator for neural crest cellR01GM097074 · NIGMS · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI KIM, JOOMYEONG · 2013 to 2016
$1.1M
NIGMS NIH HHS R01 GM066225NIGMS NIH HHS R01-GM066225NIGMS NIH HHS R01 GM097074NIGMS NIH HHS R01-GM097074
6 · The paper itself

Abstract

In the current study, we tested the in vivo effects of Yy1 gene dosage on the Peg3 imprinted domain with various breeding schemes utilizing two sets of mutant alleles. The results indicated that a half dosage of Yy1 coincides with the up-regulation of Peg3 and Zim1, suggesting a repressor role of Yy1 in this imprinted domain. This repressor role of Yy1 is consistent with the observations derived from previous in vitro studies. The current study also provided an unexpected observation that the maternal allele of Peg3 is also normally expressed, and thus the expression of Peg3 is bi-allelic in the specific areas of the brain, including the choroid plexus, the PVN (Paraventricular Nucleus) and the SON (Supraoptic Nucleus) of the hypothalamus. The exact roles of the maternal allele of Peg3 in these cell types are currently unknown, but this new finding confirms the previous prediction that the maternal allele may be functional in specific cell types based on the lethality associated with the homozygotes for several mutant alleles of the Peg3 locus. Overall, these results confirm the repressor role of Yy1 in the Peg3 domain and also provide a new insight regarding the bi-allelic expression of Peg3 in mouse brain.

Indexed as

Gene DosageAllelesAnimalsBrainCarrier ProteinsChoroid PlexusDNA-Binding ProteinsGenomic ImprintingKruppel-Like Transcription FactorsMiceMutationNerve Tissue ProteinsOrgan SpecificityParaventricular Hypothalamic NucleusSupraoptic NucleusUp-RegulationCarrier ProteinsDNA-Binding ProteinsKruppel-Like Transcription FactorsNerve Tissue ProteinsPeg3 protein, mouseYy1 protein, mouseYY1 Transcription FactorZim1 protein, mouse

Identifiers

PMID25774914
PMCPMC4361396
OpenAlexW2093344231

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.