Evidence map›Paper›PMID 25774715›Full record

ArticleNature immunology2015

The transcription factor IRF1 and guanylate-binding proteins target activation of the AIM2 inflammasome by Francisella infection.

Si Ming Man, Rajendra Karki, R K Subbarao Malireddi, Geoffrey Neale, Peter Vogel, Masahiro Yamamoto, Mohamed Lamkanfi, Thirumala-Devi Kanneganti

Open access · bronzeAbstract read
In one paragraph

Article in Nature immunology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 263 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
263citing papers in PubMed, 1 pooled it
19.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

263 citing papers in PubMed, 1 synthesis or guideline pooled it, 359 citations in OpenAlex.

  1. Pooled it
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  20. PANoptosis: potential new targets and therapeutic prospects in digestive diseases.Apoptosis : an international journal on programmed cell death · 2025
    Review

203 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 4 countries.

Si Ming Man1] Department of Immunology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA. [2] School of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, Australia.ORCID 0000000250792857
Rajendra KarkiDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
R K Subbarao MalireddiDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Geoffrey NealeHartwell Center for Bioinformatics &Biotechnology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Peter VogelAnimal Resources Center and the Veterinary Pathology Core, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Masahiro YamamotoDepartment of Microbiology and Immunology, Osaka University, Osaka, Japan.
Mohamed Lamkanfi1] Department of Medical Protein Research, Vlaams Instituut voor Biotechnologie, Ghent, Belgium. [2] Department of Biochemistry, Ghent University, Ghent, Belgium.ORCID 0000000248987663
Thirumala-Devi KannegantiDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
St. Jude Children's Research Hospital · USThe University of Osaka · JPVlaams Instituut voor Biotechnologie · BE

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
Role of NLR Inflammasomes in Autoinflammatory Diseases and Host DefenseR01AR056296 · NIAMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI KANNEGANTI, THIRUMALA-DEVI · 2008 to 2022
$5.9M
Inflammatory Caspases in Innate Immunity and InflammationR37AI101935 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Thirumala-Devi Kanneganti · 2017 to 2026
$4.9M
NLR signaling in colitis and colorectal tumorigenesisR01CA163507 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI KANNEGANTI, THIRUMALA-DEVI · 2012 to 2020
$3.5M
Inflammatory Caspases in Innate Immunity and InflammationR01AI101935 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI KANNEGANTI, THIRUMALA-DEVI · 2012 to 2016
$2.2M
European Research Council 281600NCI NIH HHS CA163507NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA163507NIAID NIH HHS AI101935NIAID NIH HHS R01 AI101935NIAID NIH HHS R37 AI101935NIAMS NIH HHS AR056296NIAMS NIH HHS R01 AR056296
6 · The paper itself

Abstract

Inflammasomes are critical for mounting host defense against pathogens. The molecular mechanisms that control activation of the AIM2 inflammasome in response to different cytosolic pathogens remain unclear. Here we found that the transcription factor IRF1 was required for activation of the AIM2 inflammasome during infection with the Francisella tularensis subspecies novicida (F. novicida), whereas engagement of the AIM2 inflammasome by mouse cytomegalovirus (MCMV) or transfected double-stranded DNA did not require IRF1. Infection of F. novicida detected by the DNA sensor cGAS and its adaptor STING induced type I interferon-dependent expression of IRF1, which drove the expression of guanylate-binding proteins (GBPs); this led to intracellular killing of bacteria and DNA release. Our results reveal a specific requirement for IRF1 and GBPs in the liberation of DNA for sensing by AIM2 depending on the pathogen encountered by the cell.

Indexed as

AnimalsBacteriolysisCells, CulturedCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseDNADNA, BacterialDNA-Binding ProteinsFrancisella tularensisGene Expression RegulationGTP-Binding ProteinsInflammasomesInterferon Regulatory Factor-1Interferon Type IMiceMice, KnockoutNucleotidyltransferasesAim2 protein, mousecGAS protein, mouseCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseDNADNA, BacterialDNA-Binding ProteinsGTP-Binding ProteinsInflammasomesInterferon Regulatory Factor-1Interferon Type IIrf1 protein, mouseNucleotidyltransferases

Identifiers

PMID25774715
PMCPMC4406811
OpenAlexW1984632540

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.