Evidence map›Paper›PMID 25774512›Full record

ArticlePloS one2015

A novel multiplex PCR discriminates Bacillus anthracis and its genetically related strains from other Bacillus cereus group species.

Hirohito Ogawa, Daisuke Fujikura, Miyuki Ohnuma, Naomi Ohnishi, Bernard M Hang'ombe, Hitomi Mimuro, Takayuki Ezaki, Aaron S Mweene, Hideaki Higashi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

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  9. A classification framework forEvolutionary applications · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Hirohito OgawaHokudai Center for Zoonosis Control in Zambia, School of Veterinary Medicine, The University of Zambia, Lusaka, Zambia; Department of Disease Control, School of Veterinary Medicine, The University of Zambia, Lusaka, Zambia.
Daisuke FujikuraDivision of Infection and Immunity, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Miyuki OhnumaDivision of Infection and Immunity, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Naomi OhnishiDivision of Infection and Immunity, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Bernard M Hang'ombeDepartment of Paraclinical Studies, School of Veterinary Medicine, The University of Zambia, Lusaka, Zambia.
Hitomi MimuroDivision of Bacteriology, Department of Infectious Diseases Control, International Research Center for Infectious Diseases, Institute of Medical Science, The University of Tokyo, Tokyo, Japan; Pathogenic Microbes Repository Unit, International Research Center for Infectious Diseases, Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
Takayuki EzakiDepartment of Microbiology, Regeneration and Advanced Medical Science, Gifu University Graduate School of Medicine, Gifu, Japan.
Aaron S MweeneDepartment of Disease Control, School of Veterinary Medicine, The University of Zambia, Lusaka, Zambia.
Hideaki HigashiHokudai Center for Zoonosis Control in Zambia, School of Veterinary Medicine, The University of Zambia, Lusaka, Zambia; Department of Disease Control, School of Veterinary Medicine, The University of Zambia, Lusaka, Zambia; Division of Infection and Immunity, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan; Global Station for Zoonosis Control, Global Institution for Collaborative Research and Education, Hokkaido University, Sapporo, Japan.
University of Zambia · ZMHokkaido University · JPGifu University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anthrax is an important zoonotic disease worldwide that is caused by Bacillus anthracis, a spore-forming pathogenic bacterium. A rapid and sensitive method to detect B. anthracis is important for anthrax risk management and control in animal cases to address public health issues. However, it has recently become difficult to identify B. anthracis by using previously reported molecular-based methods because of the emergence of B. cereus, which causes severe extra-intestinal infection, as well as the human pathogenic B. thuringiensis, both of which are genetically related to B. anthracis. The close genetic relation of chromosomal backgrounds has led to complexity of molecular-based diagnosis. In this study, we established a B. anthracis multiplex PCR that can screen for the presence of B. anthracis virulent plasmids and differentiate B. anthracis and its genetically related strains from other B. cereus group species. Six sets of primers targeting a chromosome of B. anthracis and B. anthracis-like strains, two virulent plasmids, pXO1 and pXO2, a bacterial gene, 16S rRNA gene, and a mammalian gene, actin-beta gene, were designed. The multiplex PCR detected approximately 3.0 CFU of B. anthracis DNA per PCR reaction and was sensitive to B. anthracis. The internal control primers also detected all bacterial and mammalian DNAs examined, indicating the practical applicability of this assay as it enables monitoring of appropriate amplification. The assay was also applied for detection of clinical strains genetically related to B. anthracis, which were B. cereus strains isolated from outbreaks of hospital infections in Japan, and field strains isolated in Zambia, and the assay differentiated B. anthracis and its genetically related strains from other B. cereus group strains. Taken together, the results indicate that the newly developed multiplex PCR is a sensitive and practical method for detecting B. anthracis.

Indexed as

Multiplex Polymerase Chain ReactionAnimal DiseasesAnimalsAnthraxBacillus anthracisBacillus cereusChromosomes, BacterialGram-Positive Bacterial InfectionsHumansPlasmidsRNA, BacterialRNA, Ribosomal, 16SSensitivity and SpecificityRNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID25774512
PMCPMC4361551
OpenAlexW1992591788

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.