Evidence map›Paper›PMID 25773595›Full record

ArticleMolecular cell2015

Myristoylome profiling reveals a concerted mechanism of ARF GTPase deacylation by the bacterial protease IpaJ.

Nikolay Burnaevskiy, Tao Peng, L Evan Reddick, Howard C Hang, Neal M Alto

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
  2. Context-dependent roles of palmitoylation in acute respiratory distress syndrome: integrating inflammation, cell death and repair.European respiratory review : an official journal of the European Respiratory Society · 2025
    Review
  3. Structural determinants of protein kinase A essential for CFTR channel activation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. DAT, deacylating autotransporter toxin, fromProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Cell biology of protein-lipid conjugation.Cell structure and function · 2023
    Review
  11. Article
  12. Article
  13. ThemBio · 2022
    Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
  20. Cross-Kingdom Activation ofJournal of bacteriology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Nikolay BurnaevskiyDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75390-8816, USA.
Tao PengLaboratory of Chemical Biology and Microbial Pathogenesis, The Rockefeller University, New York, NY 10065, USA.
L Evan ReddickDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75390-8816, USA.
Howard C HangLaboratory of Chemical Biology and Microbial Pathogenesis, The Rockefeller University, New York, NY 10065, USA.
Neal M AltoDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75390-8816, USA. Electronic address: neal.alto@utsouthwestern.edu.
Rockefeller University · USThe University of Texas Southwestern Medical Center · USSouthwestern Medical Center · US

Funding

Type III effector regulation of host signal transduction systemsR01AI083359 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI ALTO, NEAL MATHEW · 2009 to 2024
$6.3M
Studies on Protein LipidationR01GM087544 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI HANG, HOWARD C · 2010 to 2023
$4.4M
Bacterial Regulation of Eukaryotic Signaling Enzymes: Structure and FunctionR01GM100486 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI ALTO, NEAL MATHEW · 2012 to 2015
$1.2M
Type III effector regulation of host GTPase signalingR56AI083359 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI ALTO, NEAL MATHEW · 2014 to 2014
$452k
NIAID NIH HHS R01 AI083359NIAID NIH HHS R01AI083359NIAID NIH HHS R56 AI083359NIGMS NIH HHS R01 GM087544NIGMS NIH HHS R01GM087544NIGMS NIH HHS R01 GM100486NIGMS NIH HHS R01GM100486PHS HHS I-F32-AIO98384
6 · The paper itself

Abstract

N-myristoylation is an essential fatty acid modification that governs the localization and activity of cell signaling enzymes, architectural proteins, and immune regulatory factors. Despite its importance in health and disease, there are currently no methods for reversing protein myristoylation in vivo. Recently, the Shigella flexneri protease IpaJ was found to cleave myristoylated glycine of eukaryotic proteins, yet the discriminatory mechanisms of substrate selection required for targeted demyristoylation have not yet been evaluated. Here, we performed global myristoylome profiling of cells treated with IpaJ under distinct physiological conditions. The protease is highly promiscuous among diverse N-myristoylated proteins in vitro but is remarkably specific to Golgi-associated ARF/ARL family GTPases during Shigella infection. Reconstitution studies revealed a mechanistic framework for substrate discrimination based on IpaJ's function as a GTPase "effector" of bacterial origin. We now propose a concerted model for IpaJ function that highlights its potential for programmable demyristoylation in vivo.

Indexed as

Protein Processing, Post-TranslationalADP-Ribosylation Factor 1ADP-Ribosylation Factor 6ADP-Ribosylation FactorsAmino Acid SequenceAntigens, BacterialCrystallography, X-RayEscherichia coliHeLa CellsHumansHydrophobic and Hydrophilic InteractionsModels, MolecularMolecular Sequence DataMyristic AcidProtein BindingProtein ConformationADP-Ribosylation Factor 1ADP-Ribosylation Factor 6ADP-Ribosylation FactorsAntigens, BacterialIpaJ protein, Shigella flexneriMyristic AcidRecombinant Proteins

Identifiers

PMID25773595
PMCPMC4385471
OpenAlexW2052275800

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.