Evidence map›Paper›PMID 25773315›Full record

ArticleMolecular genetics and genomics : MGG2015

Transcriptome analysis of the variations between autotetraploid Paulownia tomentosa and its diploid using high-throughput sequencing.

Guoqiang Fan, Limin Wang, Minjie Deng, Suyan Niu, Zhenli Zhao, Enkai Xu, Xibin Cao, Xiaoshen Zhang

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Comparative proteomic analysis of autotetraploid and diploidPhysiology and molecular biology of plants : an international journal of functional plant biology · 2017
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Guoqiang FanInstitute of Paulownia, Henan Agricultural University, 95 Wenhua Road, Zhengzhou, 450002, Henan, China, fanguoqiangdr@163.com.
Limin Wang
Minjie Deng
Suyan Niu
Zhenli Zhao
Enkai Xu
Xibin Cao
Xiaoshen Zhang
Henan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Timber properties of autotetraploid Paulownia tomentosa are heritable with whole genome duplication, but the molecular mechanisms for the predominant characteristics remain unclear. To illuminate the genetic basis, high-throughput sequencing technology was used to identify the related unigenes. 2677 unigenes were found to be significantly differentially expressed in autotetraploid P. tomentosa. In total, 30 photosynthesis-related, 21 transcription factor-related, and 22 lignin-related differentially expressed unigenes were detected, and the roles of the peroxidase in lignin biosynthesis, MYB DNA-binding proteins, and WRKY proteins associated with the regulation of relevant hormones are extensively discussed. The results provide transcriptome data that may bring a new perspective to explain the polyploidy mechanism in the long growth cycle of plants and offer some help to the future Paulownia breeding.

Indexed as

DiploidyGene Expression Regulation, PlantPolyploidyGene Expression ProfilingGene OntologyGenes, PlantHigh-Throughput Nucleotide SequencingLigninMagnoliopsidaMolecular Sequence AnnotationPhotosynthesisPlant ProteinsReverse Transcriptase Polymerase Chain ReactionTranscription FactorsTranscriptomeLigninPlant ProteinsTranscription Factors

Identifiers

PMID25773315
OpenAlexW2033879687

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.