Evidence map›Paper›PMID 25772352›Full record

ArticleCell reports2015

Axis Patterning by BMPs: Cnidarian Network Reveals Evolutionary Constraints.

Grigory Genikhovich, Patrick Fried, M Mandela Prünster, Johannes B Schinko, Anna F Gilles, David Fredman, Karin Meier, Dagmar Iber, Ulrich Technau

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
26.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 117 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Cells · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Grigory GenikhovichDepartment for Molecular Evolution and Development, Centre of Organismal Systems Biology, University of Vienna, Althanstraße 14, 1090 Vienna, Austria.
Patrick FriedDepartment for Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 4058 Basel, Switzerland; Swiss Institute of Bioinformatics, Mattenstrasse 26, 4058 Basel, Switzerland.
M Mandela PrünsterDepartment for Molecular Evolution and Development, Centre of Organismal Systems Biology, University of Vienna, Althanstraße 14, 1090 Vienna, Austria.
Johannes B SchinkoDepartment for Molecular Evolution and Development, Centre of Organismal Systems Biology, University of Vienna, Althanstraße 14, 1090 Vienna, Austria.
Anna F GillesDepartment for Molecular Evolution and Development, Centre of Organismal Systems Biology, University of Vienna, Althanstraße 14, 1090 Vienna, Austria.
David FredmanDepartment for Molecular Evolution and Development, Centre of Organismal Systems Biology, University of Vienna, Althanstraße 14, 1090 Vienna, Austria; Computational Biology Unit, University of Bergen, Thormøhlensgt. 55, 5008 Bergen, Norway.
Karin MeierDepartment for Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 4058 Basel, Switzerland.
Dagmar IberDepartment for Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 4058 Basel, Switzerland; Swiss Institute of Bioinformatics, Mattenstrasse 26, 4058 Basel, Switzerland.
Ulrich TechnauDepartment for Molecular Evolution and Development, Centre of Organismal Systems Biology, University of Vienna, Althanstraße 14, 1090 Vienna, Austria. Electronic address: ulrich.technau@univie.ac.at.
University of Vienna · ATSIB Swiss Institute of Bioinformatics · CHETH Zurich · CHUniversity of Bergen · NO

Funding

Austrian Science Fund FWF P 22717Austrian Science Fund FWF P 26962
6 · The paper itself

Abstract

BMP signaling plays a crucial role in the establishment of the dorso-ventral body axis in bilaterally symmetric animals. However, the topologies of the bone morphogenetic protein (BMP) signaling networks vary drastically in different animal groups, raising questions about the evolutionary constraints and evolvability of BMP signaling systems. Using loss-of-function analysis and mathematical modeling, we show that two signaling centers expressing different BMPs and BMP antagonists maintain the secondary axis of the sea anemone Nematostella. We demonstrate that BMP signaling is required for asymmetric Hox gene expression and mesentery formation. Computational analysis reveals that network parameters related to BMP4 and Chordin are constrained both in Nematostella and Xenopus, while those describing the BMP signaling modulators can vary significantly. Notably, only chordin, but not bmp4 expression needs to be spatially restricted for robust signaling gradient formation. Our data provide an explanation of the evolvability of BMP signaling systems in axis formation throughout Eumetazoa.

Identifiers

PMID25772352
PMCPMC4460265
OpenAlexW2009861584

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.