Evidence map›Paper›PMID 25765928›Full record

ReviewCurrent opinion in plant biology2015

Epigenetic and developmental regulation in plant polyploids.

Qingxin Song, Z Jeffrey Chen

Open access · greenAbstract readReview
In one paragraph

Review in Current opinion in plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed
28.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed, 240 citations in OpenAlex.

  1. Article
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  15. Review
  16. Epigenetics in the modern era of crop improvements.Science China. Life sciences · 2025
    Review
  17. Article
  18. Article
  19. Review
  20. Establishment of a genome map-based karyotype ofFrontiers in plant science · 2025
    Article

50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Qingxin SongDepartment of Molecular Biosciences, Institute for Cellular and Molecular Biology, Center for Computational Biology and Bioinformatics, The University of Texas at Austin, Austin, TX 78712, USA.
Z Jeffrey ChenDepartment of Molecular Biosciences, Institute for Cellular and Molecular Biology, Center for Computational Biology and Bioinformatics, The University of Texas at Austin, Austin, TX 78712, USA; State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China. Electronic address: zjchen@austin.utexas.edu.
Nanjing Agricultural University · CNThe University of Texas at Austin · US

Funding

Molecular Mechanisms of Genome DuplicationR01GM067015 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI CHEN, ZENGJIAN JEFFREY · 2003 to 2009
$1.4M
NIGMS NIH HHS GM067015NIGMS NIH HHS R01 GM067015
6 · The paper itself

Abstract

Polyploidy or whole-genome duplication occurs in some animals and many flowering plants, including many important crops such as wheat, cotton and oilseed rape. The prevalence of polyploidy in the plant kingdom suggests it as an important evolutionary feature for plant speciation and crop domestication. Studies of natural and synthetic polyploids have revealed rapid and dynamic changes in genomic structure and gene expression after polyploid formation. Growing evidence suggests that epigenetic modifications can alter homoeologous gene expression and reprogram gene expression networks, which allows polyploids to establish new cytotypes, grow vigorously and promote adaptation in local environments. Sequence and gene expression changes in polyploids have been well documented and reviewed elsewhere. This review is focused on developmental regulation and epigenetic changes including DNA methylation and histone modifications in polyploids.

Indexed as

Epigenesis, GeneticPlant DevelopmentPolyploidyDNA MethylationHistonesPlant ProteinsPlantsHistonesPlant Proteins

Identifiers

PMID25765928
PMCPMC4395545
OpenAlexW2045698248

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.