Evidence map›Paper›PMID 25765920›Full record

ReviewTrends in genetics : TIG2015

Evolution and population genomics of the Lyme borreliosis pathogen, Borrelia burgdorferi.

Stephanie N Seifert, Camilo E Khatchikian, Wei Zhou, Dustin Brisson

Open access · greenAbstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Evolutionary Genetics ofCurrent issues in molecular biology · 2021
    Review
  5. Evolutionary ecology of Lyme Borrelia.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Review
  6. Plasticity in early immune evasion strategies of a bacterial pathogen.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Frontiers in immunology · 2017
    Review
  12. Article
  13. Article
  14. Evolutionary aspects of emerging Lyme disease in Canada.Applied and environmental microbiology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Stephanie N SeifertEvolution and Ecology of Disease Systems Laboratory, University of Pennsylvania, 433 South University Ave, Philadelphia, PA 19104, USA.
Camilo E KhatchikianEvolution and Ecology of Disease Systems Laboratory, University of Pennsylvania, 433 South University Ave, Philadelphia, PA 19104, USA.
Wei ZhouEvolution and Ecology of Disease Systems Laboratory, University of Pennsylvania, 433 South University Ave, Philadelphia, PA 19104, USA.
Dustin BrissonEvolution and Ecology of Disease Systems Laboratory, University of Pennsylvania, 433 South University Ave, Philadelphia, PA 19104, USA. Electronic address: dbrisson@sas.upenn.edu.
University of Pennsylvania · US

Funding

Training in Emerging Infectious DiseasesT32AI055400 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI CHERRY, SARA, HENSLEY, SCOTT ERIC · 2003 to 2022
$4.4M
Phylogeographic dynamics of a vector and pathogen in a natural environmentR01AI097137 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI BRISSON, DUSTIN · 2012 to 2016
$1.9M
Causes and consequences of ospC variation in Borrelia burgdorferi to Lyme diseaseR01AI076342 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI BRISSON, DUSTIN · 2008 to 2011
$1.4M
NIAID NIH HHS AI076342NIAID NIH HHS AI097137NIAID NIH HHS R01 AI076342NIAID NIH HHS R01 AI097137NIAID NIH HHS T32 AI055400
6 · The paper itself

Abstract

Population genomic studies have the potential to address many unresolved questions about microbial pathogens by facilitating the identification of genes underlying ecologically important traits, such as novel virulence factors and adaptations to humans or other host species. Additionally, this framework improves estimations of population demography and evolutionary history to accurately reconstruct recent epidemics and identify the molecular and environmental factors that resulted in the outbreak. The Lyme disease bacterium, Borrelia burgdorferi, exemplifies the power and promise of the application of population genomics to microbial pathogens. We discuss here the future of evolutionary studies in B. burgdorferi, focusing on the primary evolutionary forces of horizontal gene transfer, natural selection, and migration, as investigations transition from analyses of single genes to genomes.

Indexed as

Evolution, MolecularGenetics, PopulationGenomicsBorrelia burgdorferiHumansLyme DiseasePhylogenyPhylogeographyResearchSelection, Geneticdemographyhorizontal gene transfermicrobial pathogensnatural selectionpopulation genomicsvector-borne pathogens

Identifiers

PMID25765920
PMCPMC4380588
OpenAlexW2170791157

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.