Evidence map›Paper›PMID 25765704›Full record

ArticleBMC genomics2015

Characterization of a novel RXR receptor in the salmon louse (Lepeophtheirus salmonis, Copepoda) regulating growth and female reproduction.

Christiane Eichner, Sussie Dalvin, Rasmus Skern-Mauritzen, Ketil Malde, Heidi Kongshaug, Frank Nilsen

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Christiane EichnerDepartment of Biology, Sea Lice Research Centre, University of Bergen, Bergen, Norway. Christiane.Eichner@bio.uib.no.
Sussie DalvinDepartment of Biology, Sea Lice Research Centre, University of Bergen, Bergen, Norway. sussie.dalvin@imr.no.
Rasmus Skern-MauritzenInstitute of Marine Research, Bergen, Norway. rasmus.skern@imr.no.
Ketil MaldeInstitute of Marine Research, Bergen, Norway. ketil.malde@imr.no.
Heidi KongshaugDepartment of Biology, Sea Lice Research Centre, University of Bergen, Bergen, Norway. Heidi.Kongshaug@bio.uib.no.
Frank NilsenDepartment of Biology, Sea Lice Research Centre, University of Bergen, Bergen, Norway. frank.nilsen@bio.uib.no.
Norwegian Institute of Marine Research · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNuclear receptors have crucial roles in all metazoan animals as regulators of gene transcription. A wide range of studies have elucidated molecular and biological significance of nuclear receptors but there are still a large number of animals where the knowledge is very limited. In the present study we have identified an RXR type of nuclear receptor in the salmon louse (Lepeophtheirus salmonis) (i.e. LsRXR). RXR is one of the two partners of the Ecdysteroid receptor in arthropods, the receptor for the main molting hormone 20-hydroxyecdysone (E20) with a wide array of effects in arthropods.

resultsFive different LsRXR transcripts were identified by RACE showing large differences in domain structure. The largest isoforms contained complete DNA binding domain (DBD) and ligand binding domain (LBD), whereas some variants had incomplete or no DBD. LsRXR is transcribed in several tissues in the salmon louse including ovary, subcuticular tissue, intestine and glands. By using Q-PCR it is evident that the LsRXR mRNA levels vary throughout the L. salmonis life cycle. We also show that the truncated LsRXR transcript comprise about 50% in all examined samples. We used RNAi to knock-down the transcription in adult reproducing female lice. This resulted in close to zero viable offspring. We also assessed the LsRXR RNAi effects using a L. salmonis microarray and saw significant effects on transcription in the female lice. Transcription of the major yolk proteins was strongly reduced by knock-down of LsRXR. Genes involved in lipid metabolism and transport were also down regulated. Furthermore, different types of growth processes were up regulated and many cuticle proteins were present in this group.

conclusionsThe present study demonstrates the significance of LsRXR in adult female L. salmonis and discusses the functional aspects in relation to other arthropods. LsRXR has a unique structure that should be elucidated in the future.

Indexed as

AnimalsCopepodaDNA-Binding ProteinsEcdysteroneFemaleHost-Parasite InteractionsLife Cycle StagesLipid MetabolismMolecular Sequence DataOvaryProtein Structure, TertiaryReceptors, Retinoic AcidReproductionRNA, MessengerSalmonDNA-Binding ProteinsEcdysteroneReceptors, Retinoic AcidRNA, Messenger

Identifiers

PMID25765704
PMCPMC4333900
OpenAlexW1987935322

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.