Evidence map›Paper›PMID 25765657›Full record

ArticleNucleic acids research2015

A fluorescence-based helicase assay: application to the screening of G-quadruplex ligands.

Oscar Mendoza, Nassima Meriem Gueddouda, Jean-Baptiste Boulé, Anne Bourdoncle, Jean-Louis Mergny

Abstract read
In one paragraph

Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Decoding G-Quadruplexes Sequence inPlants (Basel, Switzerland) · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Creation and resolution of non-B-DNA structural impediments during replication.Critical reviews in biochemistry and molecular biology · 2022
    Article
  11. Review
  12. Review
  13. Human DDX17 Unwinds Rift Valley Fever Virus Non-Coding RNAs.International journal of molecular sciences · 2020
    Article
  14. Article
  15. Article
  16. Modulation of DNA structure formation using small molecules.Biochimica et biophysica acta. Molecular cell research · 2019
    Review
  17. Article
  18. Article
  19. Review
  20. DNA-unwinding activity ofThe Journal of biological chemistry · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Oscar MendozaUniversity of Bordeaux, ARNA laboratory, Bordeaux, France INSERM, U869, IECB, Pessac, France oscar.mendoza@u-bordeaux.fr.
Nassima Meriem GueddoudaUniversity of Bordeaux, ARNA laboratory, Bordeaux, France INSERM, U869, IECB, Pessac, France.
Jean-Baptiste BouléCNRS, UMR7196, Muséum National d'Histoire Naturelle, 75005 Paris, France.
Anne BourdoncleINSERM, U869, IECB, Pessac, France Univ. Poitiers, 40 avenue du recteur Pineau, 86000 Poitiers, France a.bourdoncle@u-bordeaux.fr.
Jean-Louis MergnyUniversity of Bordeaux, ARNA laboratory, Bordeaux, France INSERM, U869, IECB, Pessac, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Helicases, enzymes that unwind DNA or RNA structure, are present in the cell nucleus and in the mitochondrion. Although the majority of the helicases unwind DNA or RNA duplexes, some of these proteins are known to resolve unusual structures such as G-quadruplexes (G4) in vitro. G4 may form stable barrier to the progression of molecular motors tracking on DNA. Monitoring G4 unwinding by these enzymes may reveal the mechanisms of the enzymes and provides information about the stability of these structures. In the experiments presented herein, we developed a reliable, inexpensive and rapid fluorescence-based technique to monitor the activity of G4 helicases in real time in a 96-well plate format. This system was used to screen a series of G4 structures and G4 binders for their effect on the Pif1 enzyme, a 5' to 3' DNA helicase. This simple assay should be adaptable to analysis of other helicases and G4 structures.

Indexed as

G-QuadruplexesDNA HelicasesEnzyme AssaysEnzyme InhibitorsFluorescenceLigandsDNA HelicasesEnzyme InhibitorsLigands

Identifiers

PMID25765657
PMCPMC4477640

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.