Evidence map›Paper›PMID 25765539›Full record

ArticleScientific reports2015

Tissue- and time-dependent transcription in Ixodes ricinus salivary glands and midguts when blood feeding on the vertebrate host.

Michalis Kotsyfakis, Alexandra Schwarz, Jan Erhart, José M C Ribeiro

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
11.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 112 citations in OpenAlex.

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  6. Serpins in the Spotlight: Novel Bioinformatic Insights IntoBiochemistry research international · 2025
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  7. The hypusine pathway inFrontiers in cellular and infection microbiology · 2025
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  19. Mialostatin, a Novel Midgut Cystatin fromInternational journal of molecular sciences · 2021
    Article
  20. Review

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Michalis KotsyfakisInstitute of Parasitology, Biology Center of the Czech Academy of Sciences, Branisovska 31, 37005 Budweis, Czech Republic.
Alexandra SchwarzInstitute of Parasitology, Biology Center of the Czech Academy of Sciences, Branisovska 31, 37005 Budweis, Czech Republic.
Jan ErhartInstitute of Parasitology, Biology Center of the Czech Academy of Sciences, Branisovska 31, 37005 Budweis, Czech Republic.
José M C RibeiroSection of Vector Biology, Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, 12735 Twinbrook Parkway room 2E32D, Rockville MD 20852, USA.
Vector (United States) · US

Funding

Vector-Borne Diseases: Biology Of Vector Host RelationshipZIAAI000810 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI RIBEIRO, JOSE · 2009 to 2025
$20.8M
Intramural NIH HHS
6 · The paper itself

Abstract

Ixodes ricinus is a tick that transmits the pathogens of Lyme and several arboviral diseases. Pathogens invade the tick midgut, disseminate through the hemolymph, and are transmitted to the vertebrate host via the salivary glands; subverting these processes could be used to interrupt pathogen transfer. Here, we use massive de novo sequencing to characterize the transcriptional dynamics of the salivary and midgut tissues of nymphal and adult I. ricinus at various time points after attachment on the vertebrate host. Members of a number of gene families show stage- and time-specific expression. We hypothesize that gene expression switching may be under epigenetic control and, in support of this, identify 34 candidate proteins that modify histones. I. ricinus-secreted proteins are encoded by genes that have a non-synonymous to synonymous mutation rate even greater than immune-related genes. Midgut transcriptome (mialome) analysis reveals several enzymes associated with protein, carbohydrate, and lipid digestion, transporters and channels that might be associated with nutrient uptake, and immune-related transcripts including antimicrobial peptides. This publicly available dataset supports the identification of protein and gene targets for biochemical and physiological studies that exploit the transmission lifecycle of this disease vector for preventative and therapeutic purposes.

Indexed as

Transcription, GeneticAnimalsCluster AnalysisComputational BiologyGene Expression ProfilingIntestinal MucosaIxodesMolecular Sequence AnnotationOrgan SpecificityPhylogenyPolymorphism, GeneticSalivary GlandsTime FactorsTranscriptome

Identifiers

PMID25765539
PMCPMC4357865
OpenAlexW2065381296

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.