Evidence map›Paper›PMID 25765046›Full record

ArticleBMC genomics2015

Precisely mapping a major gene conferring resistance to Hessian fly in bread wheat using genotyping-by-sequencing.

Genqiao Li, Ying Wang, Ming-Shun Chen, Erena Edae, Jesse Poland, Edward Akhunov, Shiaoman Chao, Guihua Bai, Brett F Carver, Liuling Yan

Abstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Identification and molecular mapping of a new Hessian fly resistance gene in the spring barley variety 'Golf'.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Precise mapping of QTL for Hessian fly resistance in the hard winter wheat cultivar 'Overland'.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  6. Article
  7. Review
  8. Article
  9. Identification of two novel Hessian fly resistance genes H35 and H36 in a hard winter wheat line SD06165.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  10. Development and deployment of KASP markers for multiple alleles of Lr34 in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  11. Article
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  15. Article
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  17. Article
  18. Practical application of genomic selection in a doubled-haploid winter wheat breeding program.Molecular breeding : new strategies in plant improvement · 2017
    Article
  19. TaXA21-A1 on chromosome 5AL is associated with resistance to multiple pests in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Genqiao LiDepartment of Plant and Soil Sciences, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA. genqiao.li@okstate.edu.
Ying WangDepartment of Plant and Soil Sciences, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA. ying.wang@okstate.edu.
Ming-Shun ChenHard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, 66506, USA. mchen@ksu.edu.
Erena EdaeHard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, 66506, USA. erenae@ksu.edu.
Jesse PolandDepartment of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA. jpoland@ksu.edu.
Edward AkhunovDepartment of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA. eakhunov@ksu.edu.
Shiaoman ChaoUnited States Department of Agriculture, Agricultural Research Service, Cereal Crops Research Unit, Fargo, ND, 58102, USA. Shiaoman.Chao@ars.usda.gov.
Guihua BaiHard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, 66506, USA. gbai@ksu.edu.
Brett F CarverDepartment of Plant and Soil Sciences, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA. brett.carver@okstate.edu.
Liuling YanDepartment of Plant and Soil Sciences, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA. liuling.yan@okstate.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOne of the reasons hard red winter wheat cultivar 'Duster' (PI 644016) is widely grown in the southern Great Plains is that it confers a consistently high level of resistance to biotype GP of Hessian fly (Hf). However, little is known about the genetic mechanism underlying Hf resistance in Duster. This study aimed to unravel complex structures of the Hf region on chromosome 1AS in wheat by using genotyping-by-sequencing (GBS) markers and single nucleotide polymorphism (SNP) markers.

resultsDoubled haploid (DH) lines generated from a cross between two winter wheat cultivars, 'Duster' and 'Billings' , were used to identify genes in Duster responsible for effective and consistent resistance to Hf. Segregation in reaction of the 282 DH lines to Hf biotype GP fit a one-gene model. The DH population was genotyped using 2,358 markers developed using the GBS approach. A major QTL, explaining 88% of the total phenotypic variation, was mapped to a chromosome region that spanned 178 cM and contained 205 GBS markers plus 1 SSR marker and 1 gene marker, with 0.86 cM per marker in genetic distance. The analyses of GBS marker sequences and further mapping of SSR and gene markers enabled location of the QTL-containing linkage group on the short arm of chromosome 1A. Comparative mapping of the common markers for the gene for QHf.osu-1A (d) in Duster and the Hf-resistance gene for QHf.osu-1A (74) in cultivar '2174' showed that the two Hf resistance genes are located on the same chromosome arm 1AS, only 11.2 cM apart in genetic distance. The gene at QHf.osu-1A (d) in Duster has been delimited within a 2.7 cM region.

conclusionTwo distinct resistance genes exist on the short arm of chromosome 1A as found in the two hard red winter cultivars, 2174 and Duster. Whereas the Hf resistance gene in 2174 is likely allelic to one or more of the previously mapped resistance genes (H9, H10, H11, H16, or H17) in wheat, the gene in Duster is novel and confers a more consistent phenotype than 2174 in response to biotype GP infestation in controlled-environment assays.

Indexed as

Chromosome MappingGenes, PlantAnimalsChromosomes, PlantDipteraDNAGenetic LinkageGenetic MarkersGenotypeHost-Parasite InteractionsMicrosatellite RepeatsPhenotypePlant ProteinsPolymorphism, Single NucleotideQuantitative Trait LociSequence Analysis, DNADNAGenetic MarkersPlant Proteins

Identifiers

PMID25765046
PMCPMC4347651

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.